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View Structure Prediction Details

Protein: MRPL9
Organism: Homo sapiens
Length: 267 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MRPL9.

Description E-value Query
Range
Subject
Range
gi|114559523 - gi|114559523|ref|XP_513803.2| PREDICTED: mitochondrial ribosomal protein L9 isoform 3 [Pan troglodyt...
337.0 [0..1] [267..1]
MRPL9 - mitochondrial ribosomal protein L9
337.0 [0..1] [267..1]
gi|109016246 - gi|109016246|ref|XP_001108684.1| PREDICTED: similar to mitochondrial ribosomal protein L9 [Macaca mu...
327.0 [0..1] [267..1]
RM09_MOUSE - 39S ribosomal protein L9, mitochondrial OS=Mus musculus GN=Mrpl9 PE=1 SV=2
314.0 [0..1] [266..1]
RM09_RAT - 39S ribosomal protein L9, mitochondrial OS=Rattus norvegicus GN=Mrpl9 PE=2 SV=1
300.0 [0..1] [262..1]

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Predicted Domain #1
Region A:
Residues: [1-92]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPVVTAPG RALLRAGAGR LLRGGVQELL RPRHEGNAPD LACNFSLSQN RGTVIVERWW  60
   61 KVPLAGEGRK PRLHRRHRVY KLVEDTKHRP KE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [93-267]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NLELILTQSV ENVGVRGDLV SVKKSLGRNR LLPQGLAVYA SPENKKLFEE EKLLRQEGKL  60
   61 EKIQTKAGEA TVKFLKSCRL EVGMKNNVKW ELNPEIVARH FFKNLGVVVA PHTLKLPEEP 120
  121 ITRWGEYWCE VTVNGLDTVR VPMSVVNFEK PKTKRYKYWL AQQAAKAMAP TSPQI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.69897
Match: 1p85F
Description: 70S ribosome functional complex
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle