| Protein: | GGA2 |
| Organism: | Homo sapiens |
| Length: | 613 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GGA2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..613] | [1..613] |
|
|
0.0 | [1..613] | [1..613] |
|
|
0.0 | [9..613] | [12..604] |
|
|
0.0 | [31..613] | [2..584] |
|
|
0.0 | [9..613] | [21..612] |
|
Region A: Residues: [1-159] |
1 11 21 31 41 51
| | | | | |
1 MAATAVAAAV AGTESAQGPP GPAASLELWL NKATDPSMSE QDWSAIQNFC EQVNTDPNGP 60
61 THAPWLLAHK IQSPQEKEAL YALTVLEMCM NHCGEKFHSE VAKFRFLNEL IKVLSPKYLG 120
121 SWATGKVKGR VIEILFSWTV WFPEDIKIRD AYQMLKKQG
|
| Detection Method: |  |
| Confidence: | 44.0 |
| Match: | 1mhqA |
| Description: | ADP-ribosylation factor binding protein Gga2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ADP-ribosylation factor binding | 3.85762908083934 | bayes_pls_golite062009 |
| clathrin binding | 3.30137505848907 | bayes_pls_golite062009 |
| protein binding | 2.16467447169895 | bayes_pls_golite062009 |
| binding | 2.0426788146333 | bayes_pls_golite062009 |
|
Region A: Residues: [160-390] |
1 11 21 31 41 51
| | | | | |
1 IIKQDPKLPV DKILPPPSPW PKSSIFDADE EKSKLLTRLL KSNHPEDLQA ANRLIKNLVK 60
61 EEQEKSEKVS KRVSAVEEVR SHVKVLQEML SMYRRPGQAP PDQEALQVVY ERCEKLRPTL 120
121 FRLASDTTDD DDALAEILQA NDLLTQGVLL YKQVMEGRVT FGNRVTSSLG DIPVSRVFQN 180
181 PAGCMKTCPL IDLEVDNGPA QMGTVVPSLL HQDLAALGIS DAPVTGMVSG Q
|
| Detection Method: | |
| Confidence: | 30.0 |
| Match: | 1oxzA |
| Description: | ADP-ribosylation factor binding protein Gga1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| clathrin binding | 4.81261479432124 | bayes_pls_golite062009 |
| protein binding | 1.957004610117 | bayes_pls_golite062009 |
| binding | 1.91194387645876 | bayes_pls_golite062009 |
| phosphoinositide binding | 0.45587067774604 | bayes_pls_golite062009 |
| phospholipid binding | 0.17195722324229 | bayes_pls_golite062009 |
|
Region A: Residues: [391-484] |
1 11 21 31 41 51
| | | | | |
1 NCCEEKRNPS SSTLPGGGVQ NPSADRNLLD LLSAQPAPCP LNYVSQKSVP KEVPPGTKSS 60
61 PGWSWEAGPL APSPSSQNTP LAQVFVPLES VKPS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [485-613] |
1 11 21 31 41 51
| | | | | |
1 SLPPLIVYDR NGFRILLHFS QTGAPGHPEV QVLLLTMMST APQPVWDIMF QVAVPKSMRV 60
61 KLQPASSSKL PAFSPLMPPA VISQMLLLDN PHKEPIRLRY KLTFNQGGQP FSEVGEVKDF 120
121 PDLAVLGAA
|
| Detection Method: | |
| Confidence: | 43.39794 |
| Match: | 1om9A |
| Description: | ADP-ribosylation factor binding protein Gga1 domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 1.57801165255065 | bayes_pls_golite062009 |
| binding | 1.4853299341494 | bayes_pls_golite062009 |
| transporter activity | 0.169557557237959 | bayes_pls_golite062009 |
