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View Structure Prediction Details

Protein: gi|24307921|ref|...
Organism: Homo sapiens
Length: 482 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24307921|ref|....

Description E-value Query
Range
Subject
Range
gi|114633211 - gi|114633211|ref|XP_508079.2| PREDICTED: arginyltransferase 1 [Pan troglodytes]
0.0 [1..482] [98..579]
ATE1 - arginyltransferase 1
0.0 [1..482] [37..518]
gi|109090775 - gi|109090775|ref|XP_001101531.1| PREDICTED: arginyltransferase 1 isoform 1 [Macaca mulatta]
0.0 [1..482] [37..518]
gi|55728544 - gi|55728544|emb|CAH91014.1| hypothetical protein [Pongo abelii]
gi|197099110 - gi|197099110|ref|NP_001125585.1| arginyltransferase 1 [Pongo abelii]
0.0 [1..482] [30..511]
ATE1_MACFA - Arginyl-tRNA--protein transferase 1 OS=Macaca fascicularis GN=ATE1 PE=2 SV=1
0.0 [1..482] [37..518]

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Predicted Domain #1
Region A:
Residues: [1-79]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWAHSMTVQD YQDLIDRGWR RSGKYVYKPV MNQTCCPQYT IRCRPLQFQP SKSHKKVLKK  60
   61 MLKFLAKGEV PKGSCEDEP

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 27.69897
Match: PF04376.4
Description: No description for PF04376.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [80-158]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSTMDDAVA GDFALINKLD IQCDLKTLSD DIKESLESEG KNSKKEEPQE LLQSQDFVGE  60
   61 KLGSGEPSHS VKVHTVPKP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [159-230]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKGADLSKPP CRKAKEIRKE RKRLKLMQQN PAGELEGFQA QGHPPSLFPP KAKSNQPKSL  60
   61 EDLIFESLPE NA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [231-411]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SHKLEVRLVP VSFEDPEFKS SFSQSFSLYV KYQVAIHQDP PDECGKTEFT RFLCSSPLEA  60
   61 ETPPNGPDCG YGSFHQQYWL DGKIIAVGVI DILPNCVSSV YLYYDPDYSF LSLGVYSALR 120
  121 EIAFTRQLHE KTSQLSYYYM GFYIHSCPKM KYKGQYRPSD LLCPETYVWV PIEQCLPSLE 180
  181 N

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 95.79588
Match: PF04377.6
Description: No description for PF04377.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [412-482]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKYCRFNQDP EAVDEDRSTE PDRLQVFHKR AIMPYGVYKK QQKDPSEEAA VLQYASLVGQ  60
   61 KCSERMLLFR N

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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