| Protein: | gi|24307921|ref|... |
| Organism: | Homo sapiens |
| Length: | 482 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24307921|ref|....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..482] | [98..579] |
|
|
0.0 | [1..482] | [37..518] |
|
|
0.0 | [1..482] | [37..518] |
|
|
0.0 | [1..482] | [30..511] |
|
|
0.0 | [1..482] | [37..518] |
|
Region A: Residues: [1-79] |
1 11 21 31 41 51
| | | | | |
1 MWAHSMTVQD YQDLIDRGWR RSGKYVYKPV MNQTCCPQYT IRCRPLQFQP SKSHKKVLKK 60
61 MLKFLAKGEV PKGSCEDEP
|
| Detection Method: |  |
| Confidence: | 27.69897 |
| Match: | PF04376.4 |
| Description: | No description for PF04376.4 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.524 | N/A | N/A | a.60.1 | SAM/Pointed domain |
| View | Download | 0.457 | N/A | N/A | a.60.11 | Hypothetical protein YjbJ |
| View | Download | 0.350 | N/A | N/A | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.344 | N/A | N/A | a.126.1 | Serum albumin-like |
| View | Download | 0.326 | N/A | N/A | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
|
Region A: Residues: [80-158] |
1 11 21 31 41 51
| | | | | |
1 MDSTMDDAVA GDFALINKLD IQCDLKTLSD DIKESLESEG KNSKKEEPQE LLQSQDFVGE 60
61 KLGSGEPSHS VKVHTVPKP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.777 | a.112.1 | Description not found. |
| View | Download | 0.521 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.492 | a.58.1 | Chemotaxis receptor methyltransferase CheR, N-terminal domain |
| View | Download | 0.433 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.392 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
|
Region A: Residues: [159-230] |
1 11 21 31 41 51
| | | | | |
1 GKGADLSKPP CRKAKEIRKE RKRLKLMQQN PAGELEGFQA QGHPPSLFPP KAKSNQPKSL 60
61 EDLIFESLPE NA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.575 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.457 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.440 | N/A | N/A | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.438 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.375 | N/A | N/A | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
|
Region A: Residues: [231-411] |
1 11 21 31 41 51
| | | | | |
1 SHKLEVRLVP VSFEDPEFKS SFSQSFSLYV KYQVAIHQDP PDECGKTEFT RFLCSSPLEA 60
61 ETPPNGPDCG YGSFHQQYWL DGKIIAVGVI DILPNCVSSV YLYYDPDYSF LSLGVYSALR 120
121 EIAFTRQLHE KTSQLSYYYM GFYIHSCPKM KYKGQYRPSD LLCPETYVWV PIEQCLPSLE 180
181 N
|
| Detection Method: | |
| Confidence: | 95.79588 |
| Match: | PF04377.6 |
| Description: | No description for PF04377.6 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [412-482] |
1 11 21 31 41 51
| | | | | |
1 SKYCRFNQDP EAVDEDRSTE PDRLQVFHKR AIMPYGVYKK QQKDPSEEAA VLQYASLVGQ 60
61 KCSERMLLFR N
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.433 | a.5.2 | UBA-like |
| View | Download | 0.371 | a.5.2 | UBA-like |
| View | Download | 0.363 | a.60.11 | Hypothetical protein YjbJ |
| View | Download | 0.337 | a.60.11 | Hypothetical protein YjbJ |
| View | Download | 0.318 | a.5.2 | UBA-like |
