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View Structure Prediction Details

Protein: NDUFA5
Organism: Homo sapiens
Length: 116 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NDUFA5.

Description E-value Query
Range
Subject
Range
NDUA5_MOUSE - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Mus musculus GN=Ndufa5 PE=1 SV=3
1.0E-44 [1..116] [1..116]
NDUA5_BOVIN - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Bos taurus GN=NDUFA5 PE=1 SV=3
2.0E-44 [1..116] [1..116]
gi|57095956 - gi|57095956|ref|XP_532446.1| PREDICTED: similar to NADH-ubiquinone oxidoreductase 13 kDa-B subunit (...
6.0E-44 [1..116] [1..116]
NDUA5_MACFA - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Macaca fascicularis GN=NDUFA5 PE=3 S...
8.0E-44 [1..116] [1..116]
gi|157107697, gi... - gi|157107697|ref|XP_001649896.1| NADH dehydrogenase, putative [Aedes aegypti], gi|108879508|gb|EAT43...
2.0E-43 [1..115] [35..149]
gi|91090254 - gi|91090254|ref|XP_970002.1| PREDICTED: similar to CG9007-PA [Tribolium castaneum]
2.0E-43 [1..115] [1..115]

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Predicted Domain #1
Region A:
Residues: [1-39]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGVLKKTTG LVGLAVCNTP HERLRILYTK ILDVLEEIP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [40-116]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KNAAYRKYTE QITNEKLAMV KAEPDVKKLE DQLQGGQLEE VILQAEHELN LARKMREWKL  60
   61 WEPLVEEPPA DQWKWPI

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.955
Match: 1bv4A
Description: Mannose-binding protein A, lectin domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
oxidoreductase activity 3.75809169694613 bayes_pls_golite062009
substrate-specific transporter activity 2.16986363706599 bayes_pls_golite062009
binding 2.0084788620588 bayes_pls_golite062009
receptor activity 1.45541714002846 bayes_pls_golite062009
transmembrane receptor activity 1.43788844705093 bayes_pls_golite062009
signal transducer activity 0.914967133114774 bayes_pls_golite062009
molecular transducer activity 0.914967133114774 bayes_pls_golite062009
protein binding 0.900067207195253 bayes_pls_golite062009
catalytic activity 0.133148263088045 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle