YRC Public Data Repository - Protein Structure Prediction

Protein:	YC68_PASMU, Y126...
Organism:	Pasteurella multocida
Length:	200 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YC68_PASMU, Y126....

Description	E-value	Query Range	Subject Range
Y899_PSEF5 - Maf-like protein PFL_0899 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=PFL_0899 PE=3 S...	251.0	[0..5]	[200..3]
Y936_PSEPK - Maf-like protein PP_0936 OS=Pseudomonas putida (strain KT2440) GN=maf-1 PE=3 SV=1	251.0	[0..3]	[200..1]
Y841_PSEPF - Maf-like protein Pfl01_0841 OS=Pseudomonas fluorescens (strain Pf0-1) GN=Pfl01_0841 PE=3 SV=1	250.0	[0..3]	[200..1]
Y4160_PSEU2 - Maf-like protein Psyr_4160 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=Psyr_4160 PE=3 SV=...	249.0	[0..6]	[200..4]
gi\|95109280 - gi\|95109280\|emb\|CAK13977.1\| conserved hypothetical protein; Maf protein [Pseudomonas entomophila L48... gi\|95109280, gi\|... - gi\|95109280\|emb\|CAK13977.1\| conserved hypothetical protein; Maf protein [Pseudomonas entomophila L48...	249.0	[0..3]	[200..1]
Y4169_PSE14 - Maf-like protein PSPPH_4169 OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) GN=PS...	249.0	[0..6]	[200..4]
MAF_BACHD - Septum formation protein Maf OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / J... MAF_BACHD - Septum formation protein Maf OS=Bacillus halodurans GN=maf PE=3 SV=1	248.0	[0..3]	[198..1]
MAF_BACC1 - Septum formation protein Maf OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=maf PE=3 SV=1	248.0	[0..2]	[199..12]
Y124_CHRVO - Maf-like protein CV_0124 OS=Chromobacterium violaceum GN=CV_0124 PE=3 SV=1 Y124_CHRVO - Maf-like protein CV_0124 OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NB...	247.0	[0..2]	[199..4]
MAF_BACAN - Septum formation protein Maf OS=Bacillus anthracis GN=maf PE=3 SV=1 gi\|21402501 - ref\|NP_658486.1\| Maf, Maf-like protein [Bacillus anthracis str. A2012] gi\|49187347, gi\|... - gi\|49187347\|ref\|YP_030599.1\| Maf-like protein [Bacillus anthracis str. Sterne], gi\|49181274\|gb\|AAT56... gi\|47529986, gi\|... - gi\|47529986\|ref\|YP_021335.1\| Maf-like protein [Bacillus anthracis str. 'Ames Ancestor'], gi\|47505134... gi\|30259181, gi\|... - gi\|30264523\|ref\|NP_846900.1\| Maf-like protein [Bacillus anthracis str. Ames], gi\|30259181\|gb\|AAP2838... MAF_BACAA - Septum formation protein Maf OS=Bacillus anthracis (strain A0248) GN=maf PE=3 SV=1 MAF_BACAC - Septum formation protein Maf OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=maf PE=3 SV=1 gi\|254724617 - gi\|254724617\|ref\|ZP_05186400.1\| Maf-like protein [Bacillus anthracis str. A1055] gi\|254687055 - gi\|254687055\|ref\|ZP_05150913.1\| Maf-like protein [Bacillus anthracis str. CNEVA-9066] gi\|254741597 - gi\|254741597\|ref\|ZP_05199284.1\| Maf-like protein [Bacillus anthracis str. Kruger B] gi\|254736559 - gi\|254736559\|ref\|ZP_05194265.1\| Maf-like protein [Bacillus anthracis str. Western North America USA6... gi\|167640718, gi... - gi\|167640718\|ref\|ZP_02398978.1\| septum formation protein MaF [Bacillus anthracis str. A0193], gi\|167... gi\|254757637 - gi\|254757637\|ref\|ZP_05209664.1\| Maf-like protein [Bacillus anthracis str. Australia 94] gi\|167636179, gi... - gi\|167636179\|ref\|ZP_02394483.1\| septum formation protein MaF [Bacillus anthracis str. A0442], gi\|167... gi\|254754805 - gi\|254754805\|ref\|ZP_05206840.1\| Maf-like protein [Bacillus anthracis str. Vollum] gi\|165871989, gi... - gi\|165871989\|ref\|ZP_02216630.1\| septum formation protein MaF [Bacillus anthracis str. A0488], gi\|164... gi\|190566899, gi... - gi\|190566899\|ref\|ZP_03019815.1\| septum formation protein MaF [Bacillus anthracis Tsiankovskii-I], gi... gi\|172081025, gi... - gi\|177653970\|ref\|ZP_02936011.1\| septum formation protein MaF [Bacillus anthracis str. A0174], gi\|172... gi\|170126705, gi... - gi\|170708330\|ref\|ZP_02898774.1\| septum formation protein MaF [Bacillus anthracis str. A0389], gi\|170... gi\|170667393, gi... - gi\|170688707\|ref\|ZP_02879912.1\| septum formation protein MaF [Bacillus anthracis str. A0465], gi\|170...	247.0	[0..5]	[199..3]

Back

Predicted Domain #1

Region A:
Residues: [1-200]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDFQFYLAS NSPRRAQILQ QLGFRFALCC CEIDETPLPD EKGADYVLRM AIEKNNAARQ  60
   61 QWQQAKFSQN RPHLPFLSAD TSVILEDKIL GKPKNEADAR AMLRALSART HQVITAVCVA 120
  121 DENQMQTVIQ TSHVRFKVLT EKEIQGYIAT GEPMDKAGAY GIQQLGGVFV EHIEGSFSGV 180
  181 MGLPVCETVA LLKAFGVELF

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	64.221849
Match:	1ex2A
Description:	Maf protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
binding	1.72783485959922	bayes_pls_golite062009
pyrophosphatase activity	0.442220291187313	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides	0.422005572981264	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	0.421915415135494	bayes_pls_golite062009
protein binding	0.39728703257702	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: