YRC Public Data Repository - Protein Structure Prediction

Protein:	YB61_HAEIN, Y116...
Organism:	Haemophilus influenzae
Length:	138 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YB61_HAEIN, Y116....

Description	E-value	Query Range	Subject Range
gi\|229811198, gi... - gi\|229846194\|ref\|ZP_04466306.1\| histidinol-phosphate aminotransferase [Haemophilus influenzae 7P49H1... gi\|42631463 - gi\|42631463\|ref\|ZP_00157001.1\| COG2050: Uncharacterized protein, possibly involved in aromatic compo... gi\|145271620, gi... - gi\|145639317\|ref\|ZP_01794923.1\| hypothetical protein CGSHiII_01164 [Haemophilus influenzae PittII], ...	136.0	[0..1]	[138..1]
gi\|68249710, gi\|... - gi\|68249710\|ref\|YP_248822.1\| hypothetical protein NTHI1330 [Haemophilus influenzae 86-028NP], gi\|680... gi\|148826226, gi... - gi\|148826226\|ref\|YP_001290979.1\| hypothetical protein CGSHiEE_06235 [Haemophilus influenzae PittEE],...	135.0	[0..1]	[138..1]
gi\|82408016, gi\|... - gi\|82408021\|pdb\|2B6E\|H Chain H, X-Ray Crystal Structure Of Protein Hi1161 From Haemophilus Influenza...	134.0	[0..3]	[138..3]
gi\|75434374, gi\|... - gi\|75434374\|ref\|ZP_00733225.1\| conserved hypothetical protein HI1161 [Actinobacillus succinogenes 13...	134.0	[0..2]	[136..22]
gi\|238724907, gi... - gi\|77975281\|ref\|ZP_00830817.1\| COG2050: Uncharacterized protein, possibly involved in aromatic compo...	132.0	[0..1]	[136..1]
gi\|108779658, gi... - gi\|108807745\|ref\|YP_651661.1\| hypothetical protein YPA_1750 [Yersinia pestis Antiqua], gi\|108779658\|... gi\|108812022, gi... - gi\|229902334\|ref\|ZP_04517454.1\| esterase [Yersinia pestis Nepal516], gi\|229680669\|gb\|EEO76765.1\| est... gi\|167470826 - gi\|167470826\|ref\|ZP_02335530.1\| esterase YdiI [Yersinia pestis FV-1] gi\|167425042, gi... - gi\|167425042\|ref\|ZP_02316795.1\| esterase YdiI [Yersinia pestis biovar Mediaevalis str. K1973002], gi... gi\|186895695, gi... - gi\|186895695\|ref\|YP_001872807.1\| thioesterase superfamily protein [Yersinia pseudotuberculosis PB1/+... gi\|169750619, gi... - gi\|170024085\|ref\|YP_001720590.1\| thioesterase superfamily protein [Yersinia pseudotuberculosis YPIII... Q66A17\|Q66A17_YERPS - Putative uncharacterized protein - Yersinia pseudotuberculosis gi\|25302230 - pir\|\|AG0293 conserved hypothetical protein YPO2406 [imported] - Yersinia pestis (strain CO92) gi\|162352415, gi... - gi\|77635582\|ref\|ZP_00797665.1\| COG2050: Uncharacterized protein, possibly involved in aromatic compo... gi\|152961084, gi... - gi\|77629386\|ref\|ZP_00791972.1\| COG2050: Uncharacterized protein, possibly involved in aromatic compo... gi\|45436847, gi\|... - gi\|45441984\|ref\|NP_993523.1\| hypothetical protein YP_2193 [Yersinia pestis biovar Microtus str. 9100... gi\|22125825, gi\|... - gi\|22125825\|ref\|NP_669248.1\| hypothetical protein y1933 [Yersinia pestis KIM], gi\|21958754\|gb\|AAM854... gi\|16122628, gi\|... - gi\|218929496\|ref\|YP_002347371.1\| hypothetical protein YPO2406 [Yersinia pestis CO92], gi\|16122628\|re... gi\|51589921, gi\|... - gi\|51596639\|ref\|YP_070830.1\| hypothetical protein YPTB2315 [Yersinia pseudotuberculosis IP 32953], g... gi\|149365684, gi... - gi\|149365684\|ref\|ZP_01887719.1\| hypothetical protein YPE_0854 [Yersinia pestis CA88-4125], gi\|149292... gi\|145209742, gi... - gi\|145598046\|ref\|YP_001162122.1\| hypothetical protein YPDSF_0743 [Yersinia pestis Pestoides F], gi\|1... gi\|165927520, gi... - gi\|165927520\|ref\|ZP_02223352.1\| esterase YdiI [Yersinia pestis biovar Orientalis str. F1991016], gi\|... gi\|229837930, gi... - gi\|229837930\|ref\|ZP_04458089.1\| esterase [Yersinia pestis biovar Orientalis str. PEXU2], gi\|22969429... gi\|229895090, gi... - gi\|229895090\|ref\|ZP_04510266.1\| esterase [Yersinia pestis Pestoides A], gi\|229701852\|gb\|EEO89875.1\| ... gi\|166207598, gi... - gi\|166210418\|ref\|ZP_02236453.1\| esterase YdiI [Yersinia pestis biovar Antiqua str. B42003004], gi\|16... gi\|229688039, gi... - gi\|229898491\|ref\|ZP_04513636.1\| esterase [Yersinia pestis biovar Orientalis str. India 195], gi\|2296... gi\|166011817, gi... - gi\|166011817\|ref\|ZP_02232715.1\| esterase YdiI [Yersinia pestis biovar Antiqua str. E1979001], gi\|165... gi\|166959004, gi... - gi\|167422192\|ref\|ZP_02313945.1\| esterase YdiI [Yersinia pestis biovar Orientalis str. MG05-1020], gi... gi\|167049611, gi... - gi\|167400758\|ref\|ZP_02306264.1\| esterase YdiI [Yersinia pestis biovar Antiqua str. UG05-0454], gi\|16... gi\|165912557, gi... - gi\|89105362\|ref\|ZP_01177883.1\| COG2050: Uncharacterized protein, possibly involved in aromatic compo...	132.0	[0..1]	[136..1]
gi\|42630033 - gi\|42630033\|ref\|ZP_00155577.1\| COG2050: Uncharacterized protein, possibly involved in aromatic compo...	132.0	[0..1]	[138..1]
gi\|168825913, gi... - gi\|32029999\|ref\|ZP_00132927.1\| COG2050: Uncharacterized protein, possibly involved in aromatic compo...	130.0	[0..2]	[138..3]
gi\|77962200, gi\|... - gi\|77962200\|ref\|ZP_00826023.1\| COG2050: Uncharacterized protein, possibly involved in aromatic compo...	130.0	[0..1]	[136..1]

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Predicted Domain #1

Region A:
Residues: [1-138]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLWKKTFTLE NLNQLCSNSA VSHLGIEISA FGEDWIEATM PVDHRTMQPF GVLHGGVSVA  60
   61 LAETIGSLAG SLCLEEGKTV VGLDINANHL RPVRSGKVTA RATPINLGRN IQVWQIDIRT 120
  121 EENKLCCVSR LTLSVINL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	33.0
Match:	2b6eA
Description:	X-Ray structure of the different crystal form of the hypothetical UPF0152 protein HI1161: NESG target IR63
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.74605540351792	bayes_pls_golite062009
CoA hydrolase activity	0.319807301869563	bayes_pls_golite062009
thiolester hydrolase activity	0.17111276403715	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: