YRC Public Data Repository - Protein Structure Prediction

Protein:	UTS2A_CYPCA
Organism:	Cyprinus carpio
Length:	125 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UTS2A_CYPCA.

Description	E-value	Query Range	Subject Range
gi\|38343960 - gi\|38343960\|emb\|CAD56908.1\| urotensin II precursor [Platichthys flesus]	190.0	[0..1]	[125..1]
UTS2G_CYPCA - Prepro-urotensin II-gamma OS=Cyprinus carpio PE=1 SV=1	178.0	[0..1]	[125..1]
gi\|190336811, gi... - gi\|47086341\|ref\|NP_998013.1\| urotensin 2, alpha [Danio rerio], gi\|32140467\|gb\|AAP69834.1\| urotensin ...	171.0	[0..1]	[125..1]
gi\|61859014 - gi\|61859014\|ref\|XP_582447.1\| PREDICTED: similar to urotensin II transcript [Bos taurus]	169.0	[0..4]	[125..2]
gi\|118344610, gi... - gi\|89331013\|emb\|CAI63878.1\| urotensin II precursor [Takifugu rubripes], gi\|87116235\|emb\|CAI53670.1\| ...	168.0	[0..1]	[125..1]
UTS2_MOUSE - Urotensin-2 OS=Mus musculus GN=Uts2 PE=2 SV=1	167.0	[0..8]	[125..6]
UTS2_RAT - Urotensin-2 OS=Rattus norvegicus GN=Uts2 PE=2 SV=1	165.0	[0..8]	[125..6]
UTS2_MACMU - Urotensin-2 OS=Macaca mulatta GN=UTS2 PE=2 SV=1	164.0	[0..4]	[125..2]
gi\|114552295 - gi\|114552295\|ref\|XP_001157678.1\| PREDICTED: urotensin 2 isoform 2 [Pan troglodytes] UTS2 - urotensin 2	159.0	[0..4]	[125..2]

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Predicted Domain #1

Region A:
Residues: [1-125]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMCNLLLSFS VLLLSCTHLV AHPVTDTADM TYSGPDSVEE AGGVSPDDFA VSDLNDLLQR  60
   61 AAVVEYSPLL SRENIKVPGQ IPKEALRELL LEKPYRLIPP SGLWGSRRQF RKRGGGADCF 120
  121 WKYCV

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

		MCM Score	SCOP Match	SCOP Description
View	Download	0.282	d.185.1	LuxS/MPP-like metallohydrolase

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.0878210954103913	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: