| Protein: | HDG3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 725 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for HDG3_ARATH.
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Region A: Residues: [1-128] |
1 11 21 31 41 51
| | | | | |
1 MSQSNMVPVA NNGDNNNDNE NNNNNNNNGG TDNTNAGNDS GDQDFDSGNT SSGNHGEGLG 60
61 NNQAPRHKKK KYNRHTQLQI SEMEAFFREC PHPDDKQRYD LSAQLGLDPV QIKFWFQNKR 120
121 TQNKNQQE
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| Detection Method: |  |
| Confidence: | 14.39794 |
| Match: | 1b72A |
| Description: | Homeobox protein hox-b1 |
Matching Structure (courtesy of the PDB): |
|
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Region A: Residues: [129-283] |
1 11 21 31 41 51
| | | | | |
1 RFENSELRNL NNHLRSENQR LREAIHQALC PKCGGQTAIG EMTFEEHHLR ILNARLTEEI 60
61 KQLSVTAEKI SRLTGIPVRS HPRVSPPNPP PNFEFGMGSK GNVGNHSRET TGPADANTKP 120
121 IIMELAFGAM EELLVMAQVA EPLWMGGFNG TSLAL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
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Region A: Residues: [284-431] |
1 11 21 31 41 51
| | | | | |
1 NLDEYEKTFR TGLGPRLGGF RTEASRETAL VAMCPTGIVE MLMQENLWST MFAGIVGRAR 60
61 THEQIMADAA GNFNGNLQIM SAEYQVLSPL VTTRESYFVR YCKQQGEGLW AVVDISIDHL 120
121 LPNINLKCRR RPSGCLIQEM HSGYSKVT
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| Detection Method: | |
| Confidence: | 8.30103 |
| Match: | 1khuA |
| Description: | Smad1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [432-607] |
1 11 21 31 41 51
| | | | | |
1 WVEHVEVDDA GSYSIFEKLI CTGQAFAANR WVGTLVRQCE RISSILSTDF QSVDSGDHIT 60
61 LTNHGKMSML KIAERIARTF FAGMTNATGS TIFSGVEGED IRVMTMKSVN DPGKPPGVII 120
121 CAATSFWLPA PPNTVFDFLR EATHRHNWDV LCNGEMMHKI AEITNGIDKR NCASLL
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| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
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Region A: Residues: [608-725] |
1 11 21 31 41 51
| | | | | |
1 RHGHTSKSKM MIVQETSTDP TASFVLYAPV DMTSMDITLH GGGDPDFVVI LPSGFAIFPD 60
61 GTGKPGGKEG GSLLTISFQM LVESGPEARL SVSSVATTEN LIRTTVRRIK DLFPCQTA
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| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
