| Protein: | RL34_ECOLI |
| Organism: | Escherichia coli |
| Length: | 46 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RL34_ECOLI.
| Description | E-value | Query Range |
Subject Range |
|
|
75.0 | [0..2] | [44..104] |
|
|
72.0 | [0..2] | [43..105] |
|
|
69.0 | [0..2] | [43..92] |
|
|
64.0 | [0..1] | [43..23] |
|
|
63.0 | [0..5] | [41..80] |
|
|
63.0 | [0..1] | [43..56] |
|
|
63.0 | [0..1] | [45..24] |
|
|
62.0 | [0..2] | [43..145] |
|
|
62.0 | [0..5] | [43..82] |
|
|
60.0 | [0..4] | [43..82] |
|
Region A: Residues: [1-46] |
1 11 21 31 41 51
| | | | | |
1 MKRTFQPSVL KRNRSHGFRA RMATKNGRQV LARRRAKGRA RLTVSK
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.362 | a.158.1 | F-box domain |
| View | Download | 0.336 | a.158.1 | F-box domain |
| View | Download | 0.316 | a.4.1 | Homeodomain-like |
| View | Download | 0.308 | a.182.1 | GatB/YqeY domain |
| View | Download | 0.301 | a.4.1 | Homeodomain-like |
| View | Download | 0.299 | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.284 | a.4.10 | N-terminal Zn binding domain of HIV integrase |
| View | Download | 0.283 | a.4.10 | N-terminal Zn binding domain of HIV integrase |
| View | Download | 0.262 | d.58.17 | Metal-binding domain |
