| Protein: | rig-PB |
| Organism: | Drosophila melanogaster |
| Length: | 1235 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rig-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
729.0 | [0..106] | [957..724] |
|
Region A: Residues: [1-142] |
1 11 21 31 41 51
| | | | | |
1 MNSQVMYHNV PTPPGNVSLA AAAPDGGLLY AGIRCINYIS APPANGEQPQ VVTMSTRINI 60
61 LALDVSPMWG LGNGGPTKPF AIVGDDLSVQ VWDCALGEAV IGHKAHQHQH EARDVRVVHH 120
121 TTNSVLMSYL ANGNILSMDA SD
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [143-393] |
1 11 21 31 41 51
| | | | | |
1 LVIYCVASNT YCRRSTFISP RNHQLTMVRC SPYNDNLFAV GTAMGNVLVC DLRKMNIVYK 60
61 FHGHKAPICG LAWREVPAAE DEKTNNLALS AEEWRSRNGG QEEKPKTKPP PLTKSKAAES 120
121 DDPFDIYNFD HLEYEFGAPI AERRRKSSED CGGEFVGLEK PAGAAVLDFV EACESVKAEL 180
181 LASRQEDKTQ HVEVTLHDCE PTKPTGPLSD ASTISNKNDA SDSTEGSLEV IQYSSSSDDA 240
241 VIVDGEAAKP K
|
| Detection Method: | |
| Confidence: | 8.045757 |
| Match: | 1k32A |
| Description: | Tricorn protease; Tricorn protease N-terminal domain; Tricorn protease domain 2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.074040936650541 | bayes_pls_golite062009 |
|
Region A: Residues: [394-986] |
1 11 21 31 41 51
| | | | | |
1 REVLHHIYHQ AEVHASGTPQ TKSEPQSNLQ VVPAISAETI SLTSVNSTHL ETLLVSIDGD 60
61 EVMMIWNTNT GAHAGKNYSK SKTAGKLNNV YWLNNHVIVS LSRHQLFFWS VEFERKMLRY 120
121 KISKDKSHSC HLQDIVSFAC DSSKEMIWLC RNNRQIGMMN PKTGRMADFY GTVAFGVRAM 180
181 AECPDDMNKI ALGCSDRRVA FFDISKLTTS CLPIDSVYVS SNVYCLAWSP NCLELAFGTF 240
241 DGTVGILDVE RMKVKTHLRT PHKKEVYSLV WQDHFIYFIV NRVLGFFDLR KSKIEPTIVN 300
301 CISRPSYLSI RDSFLFVGTD DGLLQIHERD SGMEKSWSPF IRQSALFARY VTDIAWCPLD 360
361 SNKFAVSGND RSVYVMEFQP TERNWKTLHT FTANTEKASI TSMRWSHTQK HLLLTFHIEG 420
421 KVCLWNCNAP EKPPLTITYH CPMWCGMFLP TNENIIMCSG KALSVELIDI KDALEGDEKS 480
481 ICPKVDALLN VKWASKSLTQ PYAPVLTAAE KKRQRRDQRK AAAKLEVDVA NKDQKKIQES 540
541 VTAVIDNPTN DKCTQETPVE EMLEALSLDK EQNNRSAKEC PKCKEQSPDS FTH
|
| Detection Method: | |
| Confidence: | 66.30103 |
| Match: | 1nr0A |
| Description: | Actin interacting protein 1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [987-1235] |
1 11 21 31 41 51
| | | | | |
1 SRTCLYLTQK ELNKSALEKL AIVLTEDSAK IDKSVLISKL FSSKVMAKEL IATELTNLKH 60
61 SNTKDIAPLC LAMSTFKLRE ELEQHIANKT LTERHVSLAP SVSFTLWQDC CRAYAKQMEE 120
121 KGYIMHAATY LFSQGMQSEA IKLFLANEYY KEALVHARIC LPATDPLIKT VINNWLEHLE 180
181 GTGNFAAAAL ICVLDNEMLR GYSYLRKYRN CTPEIADLMD QIKRIGQLGG VLDGCAPNEP 240
241 IHNGSTAEH
|
| Detection Method: | |
| Confidence: | 1.87 |
| Match: | 2pm6A |
| Description: | No description for 2pm6A was found. |
