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View Structure Prediction Details

Protein: PYRE_PHOLL
Organism: Photorhabdus luminescens subsp. laumondii
Length: 213 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PYRE_PHOLL.

Description E-value Query
Range
Subject
Range
gi|89093848, gi|... - gi|89093848|ref|ZP_01166794.1| orotate phosphoribosyltransferase [Oceanospirillum sp. MED92], gi|890...
201.0 [0..1] [213..1]

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Predicted Domain #1
Region A:
Residues: [1-213]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAYQREFIE LALKKQVLKF GEFTLKSGRK SPYFFNAGLF NTGRDLALIG RFYAAALLDS  60
   61 GIQCDLLFGP AYKGIPIATT TAVALAEHHD IDMPYCFNRK EAKDHGEGGT LVGSPLKGNV 120
  121 VLVDDVITAG TAIRESMEII KQHNATLAGV MICLDRQERG NGEISAIQEV ERDYGCKVFS 180
  181 IITLNDLINY LSGQPEMKDH LDAVKAYRAQ YGI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.0
Match: 1oroA
Description: Orotate PRTase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
adenine phosphoribosyltransferase activity 3.1748712918814 bayes_pls_golite062009
uracil phosphoribosyltransferase activity 3.0470646511978 bayes_pls_golite062009
hypoxanthine phosphoribosyltransferase activity 2.97347277288245 bayes_pls_golite062009
transferase activity 2.73727660668741 bayes_pls_golite062009
transferase activity, transferring pentosyl groups 2.53679639481311 bayes_pls_golite062009
catalytic activity 2.30431811394775 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 2.21367942706564 bayes_pls_golite062009
orotate phosphoribosyltransferase activity 2.02298774328915 bayes_pls_golite062009
ribose phosphate diphosphokinase activity 1.51875493459374 bayes_pls_golite062009
nucleobase binding 1.28671115202467 bayes_pls_golite062009
purine binding 1.24786927434743 bayes_pls_golite062009
amidophosphoribosyltransferase activity 0.932396739123353 bayes_pls_golite062009
binding 0.847513071499147 bayes_pls_golite062009
diphosphotransferase activity 0.749909396904601 bayes_pls_golite062009
nucleic acid binding 0.552133387792911 bayes_pls_golite062009
DNA binding 0.439741935655503 bayes_pls_golite062009
transcription regulator activity 0.396538943915776 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle