YRC Public Data Repository - Protein Structure Prediction

Protein:	PRXC_SYNY3
Organism:	Synechocystis sp. PCC 6803
Length:	276 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PRXC_SYNY3.

Description	E-value	Query Range	Subject Range
gi\|75705523, gi\|... - gi\|75812767\|ref\|YP_320384.1\| Alpha/beta hydrolase fold [Anabaena variabilis ATCC 29413], gi\|75705523...	217.0	[0..1]	[276..1]
gi\|78066438, gi\|... - gi\|78066438\|ref\|YP_369207.1\| Alpha/beta hydrolase [Burkholderia sp. 383], gi\|77967183\|gb\|ABB08563.1\|...	210.0	[0..1]	[276..1]
gi\|68529012, gi\|... - gi\|94314231\|ref\|YP_587440.1\| alpha/beta hydrolase fold [Ralstonia metallidurans CH34], gi\|93358083\|g...	208.0	[0..1]	[275..1]
gi\|71555648, gi\|... - gi\|71735095\|ref\|YP_276638.1\| arylesterase [Pseudomonas syringae pv. phaseolicola 1448A], gi\|71555648...	206.0	[0..12]	[276..95]
gi\|63258412, gi\|... - gi\|66047705\|ref\|YP_237546.1\| Alpha/beta hydrolase fold [Pseudomonas syringae pv. syringae B728a], gi...	206.0	[0..1]	[276..1]
gi\|110548464, gi... - gi\|222054303\|ref\|YP_002536665.1\| alpha/beta hydrolase fold protein [Geobacter sp. FRC-32], gi\|221563...	206.0	[0..1]	[275..1]
gi\|19914821, gi\|... - gi\|20089870\|ref\|NP_615945.1\| chloride peroxidase [Methanosarcina acetivorans C2A], gi\|19914821\|gb\|AA...	205.0	[0..1]	[276..1]
tr\|Q889S4\|Q889S4... - Arylesterase OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=PSPTO_0675 PE=4 SV=1 gi\|28867903, gi\|... - gi\|28867903\|ref\|NP_790522.1\| arylesterase [Pseudomonas syringae pv. tomato str. DC3000], gi\|28851139...	205.0	[0..1]	[275..1]
gi\|83633852, gi\|... - gi\|83645809\|ref\|YP_434244.1\| alpha/beta superfamily hydrolase/acyltransferase [Hahella chejuensis KC...	203.0	[0..3]	[276..45]
gi\|110604233, gi... - gi\|126178837\|ref\|YP_001046802.1\| alpha/beta hydrolase fold [Methanoculleus marisnigri JR1], gi\|12586...	203.0	[0..1]	[275..1]

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Predicted Domain #1

Region A:
Residues: [1-276]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPYVTVGQEN SATIDIYYED LGAGQPIVLI HGFPLNGDSW EKQVLVLLNA GYRVITYDRR  60
   61 GFGASSQPSS GYDYDTFAAD LHTLMTKLDL QNTVLVGFSM GTGEVTRYLG KYGSERVQKA 120
  121 VLMAPVPPFL LKTNDNPEGV DQSVFDGIMK AIVDDRPAYF SAFFKEFFNV DVLLGERISN 180
  181 EAIQASWNVA AGASAKGTLD CVPSWLTDFR DDLPRIDVPT LIIHGDADRI LPLESTAARL 240
  241 PKRIKNSQLE IIPGGPHAIN WTHADQVNPL LLNFLQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	48.522879
Match:	1broA
Description:	Bromoperoxidase A2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.76673721118052	bayes_pls_golite062009
hydrolase activity	1.64928663394	bayes_pls_golite062009
hydrolase activity, acting on ester bonds	0.647157802814698	bayes_pls_golite062009
3-oxoadipate enol-lactonase activity	0.5562494815394	bayes_pls_golite062009
carboxylesterase activity	0.0777997779852618	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: