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View Structure Prediction Details

Protein: PDXK_SHEEP
Organism: Ovis aries
Length: 312 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PDXK_SHEEP.

Description E-value Query
Range
Subject
Range
PDXK_BOVIN - Pyridoxal kinase OS=Bos taurus GN=PDXK PE=2 SV=1
257.0 [0..1] [312..1]
PDXK_RAT - Pyridoxal kinase OS=Rattus norvegicus GN=Pdxk PE=1 SV=1
253.0 [0..1] [312..1]
gi|110591348, gi... - gi|110591348|pdb|2F7K|B Chain B, Crystal Structure Of Human Pyridoxal Kinase, gi|110591347|pdb|2F7K|...
253.0 [0..1] [312..16]
gi|114684569 - gi|114684569|ref|XP_001145080.1| PREDICTED: similar to Chain A, Crystal Structure Of Human Pyridoxal...
252.0 [0..1] [312..1]
gi|33303899 - gi|33303899|gb|AAQ02463.1| pyridoxal kinase [synthetic construct]
251.0 [0..1] [312..1]
PDXK_MOUSE - Pyridoxal kinase OS=Mus musculus GN=Pdxk PE=1 SV=1
251.0 [0..1] [312..1]
PDXK_PIG - Pyridoxal kinase OS=Sus scrofa GN=PDXK PE=1 SV=1
249.0 [0..6] [312..16]

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Predicted Domain #1
Region A:
Residues: [1-312]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEECRVLSI QSHVVRGYVG NRAATFPLQV LGFEVDAVNS VQFSNHTGYS HWKGQVLNSD  60
   61 ELQELYDGLK LNHVNQYDYV LTGYTRDKSF LAMVVDIVQE LKQQNPRLVY VCDPVMGDQR 120
  121 NGEGAMYVPD DLLPVYREKV VPVADIITPN QFEAELLTGR KIHSQEEALE VMDMLHSMGP 180
  181 DTVVITSSNL LSPRGSDYLM ALGSQRTRAP DGSVVTQRIR MEMHKVDAVF VGTGDLFAAM 240
  241 LLAWTHKHPN NLKVACEKTV SAMHHVLQRT IKCAKAKSGE GVKPSPAQLE LRMVQSKKDI 300
  301 ESPEIVVQAT VL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.39794
Match: 1lhpA
Description: Pyridoxal kinase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
lithium ion binding 3.00550221878163 bayes_pls_golite062009
sodium ion binding 2.93046843966773 bayes_pls_golite062009
kinase activity 2.74755351135221 bayes_pls_golite062009
pyridoxal kinase activity 2.62798458074822 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 2.43969902311075 bayes_pls_golite062009
transferase activity 2.15883296431019 bayes_pls_golite062009
phosphomethylpyrimidine kinase activity 2.12104666683074 bayes_pls_golite062009
pyridoxal binding 2.04719269680858 bayes_pls_golite062009
catalytic activity 1.74474587246986 bayes_pls_golite062009
binding 1.4216897826135 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 1.37866801006693 bayes_pls_golite062009
carbohydrate kinase activity 1.32862180479506 bayes_pls_golite062009
nucleic acid binding 1.23363144435362 bayes_pls_golite062009
transcription regulator activity 1.21529398967164 bayes_pls_golite062009
potassium ion binding 1.18018952731159 bayes_pls_golite062009
alkali metal ion binding 1.18018952731159 bayes_pls_golite062009
DNA binding 0.954497955488766 bayes_pls_golite062009
transcription factor activity 0.376784274163604 bayes_pls_golite062009
protein binding 0.117280046908929 bayes_pls_golite062009

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