YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: PA2A1_NAJKA
Organism: Naja kaouthia
Length: 146 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PA2A1_NAJKA.

Description E-value Query
Range
Subject
Range
PA2A2_NAJKA - Acidic phospholipase A2 2 OS=Naja kaouthia PE=1 SV=3
200.0 [0..1] [146..1]
PA2A1_NAJAT - Acidic phospholipase A2 1 OS=Naja atra PE=1 SV=2
gi|395192 - gi|395192|emb|CAA51694.1| phospholipase a2 [Naja naja]
198.0 [0..1] [146..1]
PA2AD_NAJSP - Acidic phospholipase A2 D OS=Naja sputatrix PE=1 SV=1
198.0 [0..1] [146..1]
PA2I_LATSE - Phospholipase A2 GL16-1 OS=Laticauda semifasciata PE=2 SV=1
194.0 [0..1] [146..1]
gi|71066762 - gi|71066762|gb|AAZ22653.1| PLA-3 precursor [Notechis scutatus]
193.0 [0..1] [145..1]

Back

Predicted Domain #1
Region A:
Residues: [1-146]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPAHLLILA AVCVSPLGAF SNRPMPLNLY QFKNMIQCTV PNRSWWDFAD YGCYCGRGGS  60
   61 GTPVDDLDRC CQVHDNCYNE AEKISRCWPY FKTYSYECSQ GTLTCKGDND ACAAAVCDCD 120
  121 RLAAICFAGA PYNNNNYNID LKARCQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.522879
Match: 1gp7A
Description: Snake phospholipase A2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phospholipase A2 activity 5.6430968678228 bayes_pls_golite062009
phospholipase activity 5.38445724291842 bayes_pls_golite062009
calcium-dependent phospholipase A2 activity 4.05813159633475 bayes_pls_golite062009
lipase activity 3.51338748073942 bayes_pls_golite062009
carboxylesterase activity 2.68079964970429 bayes_pls_golite062009
cell surface binding 2.40008700958796 bayes_pls_golite062009
receptor binding 2.23831898285432 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 1.59586278808266 bayes_pls_golite062009
hydrolase activity 1.39791445456112 bayes_pls_golite062009
protein binding 1.21887607849274 bayes_pls_golite062009
binding 1.13133589773008 bayes_pls_golite062009
heparin binding 1.06811660027805 bayes_pls_golite062009
catalytic activity 0.975181414554529 bayes_pls_golite062009
bile acid binding 0.552138957911726 bayes_pls_golite062009
glycosaminoglycan binding 0.453108206649759 bayes_pls_golite062009
ion binding 0.274085741493591 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle