YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: OX26_RAT
Organism: Rattus norvegicus
Length: 124 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OX26_RAT.

Description E-value Query
Range
Subject
Range
gi|62871727 - gi|62871727|gb|AAH94274.1| Qrfp protein [Mus musculus]
190.0 [0..16] [124..16]
gi|73967934 - gi|73967934|ref|XP_850751.1| PREDICTED: similar to P518 precursor protein [Canis familiaris]
185.0 [0..10] [124..124]
gi|71682797 - gi|71682797|gb|AAI01129.1| Pyroglutamylated RFamide peptide [Homo sapiens]
184.0 [0..10] [124..11]
gi|114627226 - gi|114627226|ref|XP_001166241.1| PREDICTED: similar to preproQRFP [Pan troglodytes]
181.0 [0..10] [124..113]
OX26_BOVIN - Orexigenic neuropeptide QRFP OS=Bos taurus GN=QRFP PE=2 SV=1
173.0 [0..10] [124..11]
gi|109110018 - gi|109110018|ref|XP_001106500.1| PREDICTED: similar to RF(Arg-Phe)amide family 26 amino acid peptide...
172.0 [0..15] [124..16]

Back

Predicted Domain #1
Region A:
Residues: [1-124]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRCLCSWLCL LLPLSACFPL LDRRGPTDIG DIGARMSWVQ LTEGHTPRSV QSPRPQALLV  60
   61 VAKEQQASRR EHTGFRLGRQ DSGSEATGFL PTDSEKASGP LGTLAEELSS YSRRKGGFSF 120
  121 RFGR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle