Protein: | OTX2_RAT |
Organism: | Rattus norvegicus |
Length: | 70 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OTX2_RAT.
Description | E-value | Query Range |
Subject Range |
|
115.0 | [0..1] | [70..234] |
|
111.0 | [0..1] | [70..178] |
|
111.0 | [0..1] | [70..181] |
|
111.0 | [0..1] | [70..177] |
|
110.0 | [0..1] | [70..177] |
|
110.0 | [0..1] | [70..177] |
|
110.0 | [0..1] | [70..177] |
|
110.0 | [0..1] | [70..177] |
|
109.0 | [0..1] | [70..179] |
Region A: Residues: [1-70] |
1 11 21 31 41 51 | | | | | | 1 MTYTQASGYS QGYAGSTSYF GGMDCGSYLT PMHHQLPGPG ATLSPMGTNA VTSHLNQSPA 60 61 SLSTQGYGAS |
Detection Method: | |
Confidence: | 22.102373 |
Match: | PF03529.4 |
Description: | No description for PF03529.4 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.429 | N/A | N/A | a.60.2 | RuvA domain 2-like |
View | Download | 0.416 | N/A | N/A | a.4.8 | Ribosomal protein S18 |
View | Download | 0.409 | N/A | N/A | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
View | Download | 0.409 | N/A | N/A | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
View | Download | 0.373 | N/A | N/A | a.60.2 | RuvA domain 2-like |
View | Download | 0.361 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.333 | N/A | N/A | a.4.8 | Ribosomal protein S18 |
View | Download | 0.248 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.238 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |