| Protein: | efa-6 |
| Organism: | Caenorhabditis elegans |
| Length: | 765 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for efa-6.
| Description | E-value | Query Range |
Subject Range |
|
|
451.0 | [0..43] | [764..15] |
|
|
448.0 | [0..62] | [763..35] |
|
|
447.0 | [0..52] | [764..26] |
|
|
444.0 | [0..79] | [759..259] |
|
|
444.0 | [0..1] | [765..1] |
|
Region A: Residues: [1-228] |
1 11 21 31 41 51
| | | | | |
1 MAKVASSGAE EALATIDGAP RRNVKKSEAF VMSGDVLISL NRNVSSTYAK LLGDQLPPGT 60
61 TVASSIHPHQ LSRATASAGV SFPSMNRNGA AAQKLSRLPV STSQIERRGS LARKTSEESS 120
121 PTAIRMLKTA PIERMESTDV EESEEETVMM TTDEKENQKK PNENDDEVMV VDEEQFIDGP 180
181 SRSPVYDDVD DDLNGSLDAK DMSNNSHQQS FRSPENYSEK DTPSKHSV
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [229-283] |
1 11 21 31 41 51
| | | | | |
1 VTIDGSGVSN HYDQDGMFSH VYYSTQDTTP KHGSPSLRKQ IFESRTTPNT AASNS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [284-377] |
1 11 21 31 41 51
| | | | | |
1 SASASPSLHA TSESRGATGG VSLRSAESSN LNQTAVPSTS TNSVGGEREA AQIARNLYEL 60
61 KNCTSTQVAD RLNEQNEFSF LILVKYLELF QFST
|
| Detection Method: | |
| Confidence: | 69.221849 |
| Match: | 1bc9A |
| Description: | CYTOHESIN-1/B2-1 SEC7 DOMAIN, NMR, MINIMIZED AVERAGE STRUCTURE |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [378-650] |
1 11 21 31 41 51
| | | | | |
1 TRIDAALREF LSRVELRGES SARERLLRVF SARYLECNPA IFDSLDEVHT LTCALLLLNS 60
61 DLHGPNMGKK MTARDFITNI AHTGCTFKRE MLKTLFQSIK DNAISLQNSA KNSTANGSVA 120
121 STSRRQPQQI YEVDPDSVVE YYSGFLMRKY VRETDGGKTP FGRRSWRMVY ARLRGLVLYF 180
181 DTDEHPKATS RYASLENAVS LHHALAEPAP DYKKKSFVFR VRIAHGGEIL FQTSNQKELQ 240
241 EWCEKINFVA AAFSSPTLPL PVTSKPETAP MPR
|
| Detection Method: | |
| Confidence: | 25.154902 |
| Match: | 1xdvA |
| Description: | Experimentally Phased Structure of Human the Son of Sevenless protein at 4.1 Ang. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [651-765] |
1 11 21 31 41 51
| | | | | |
1 LPRIPCLAPI TKQLSTHEAR VAELNEMIEI VSQSVSPNQP QQLITDRWVL LSFEKRRYST 60
61 YINVLRRSLE ARKASSATTM NIMMTPTRRQ QQNQKPVVSE DRLSYTDAVN GAAAH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
