YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ILVC_PSEAE
Organism: Pseudomonas aeruginosa
Length: 338 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ILVC_PSEAE.

Description E-value Query
Range		 Subject
Range
ILVC_ALKEH - Ketol-acid reductoisomerase OS=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1)...
 0.0 [1..338] [1..338]
ILVC_GEOSL - Ketol-acid reductoisomerase OS=Geobacter sulfurreducens GN=ilvC PE=3 SV=1
ILVC_GEOSL - Ketol-acid reductoisomerase OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) GN=ilv...
 0.0 [1..338] [1..338]
ILVC_RHORT - Ketol-acid reductoisomerase OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG ...
gi|48763492 - ref|ZP_00268047.1| COG0059: Ketol-acid reductoisomerase [Rhodospirillum rubrum]
 0.0 [1..338] [1..339]
ILVC_BRASB - Ketol-acid reductoisomerase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=ilvC PE=3 SV=1
 0.0 [1..338] [1..339]
ILVC_POLSQ - Ketol-acid reductoisomerase OS=Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 / ...
 0.0 [1..338] [1..338]
ILVC_GEOMG - Ketol-acid reductoisomerase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=i...
 0.0 [1..338] [1..338]
ILVC_NITHX - Ketol-acid reductoisomerase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=ilvC PE=3 SV=1
 0.0 [1..338] [1..339]
ILVC_RHOPB - Ketol-acid reductoisomerase OS=Rhodopseudomonas palustris (strain BisB18) GN=ilvC PE=3 SV=1
 0.0 [1..338] [1..339]
ILVC_CUPMC - Ketol-acid reductoisomerase OS=Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507...
 0.0 [1..338] [1..338]
ILVC_PELPD - Ketol-acid reductoisomerase OS=Pelobacter propionicus (strain DSM 2379) GN=ilvC PE=3 SV=1
 0.0 [1..338] [1..338]

Back

Predicted Domain #1
Region A:
Residues: [1-338] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVFYDKDCD LSIIQGKKVA IIGYGSQGHA HACNLKDSGV DVTVGLRSGS ATVAKAEAHG  60
   61 LKVADVKTAV AAADVVMILT PDEFQGRLYK EEIEPNLKKG ATLAFAHGFS IHYNQVVPRA 120
  121 DLDVIMIAPK APGHTVRSEF VKGGGIPDLI AIYQDASGNA KNVALSYACG VGGGRTGIIE 180
  181 TTFKDETETD LFGEQAVLCG GCVELVKAGF ETLVEAGYAP EMAYFECLHE LKLIVDLMYE 240
  241 GGIANMNYSI SNNAEYGEYV TGPEVINAES RAAMRNALKR IQDGEYAKMF ITEGAANYPS 300
  301 MTAYRRNNAA HPIEQIGEKL RAMMPWIAAN KIVDKSKN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 108.0
Match: 1np3A
Description: Class I ketol-acid reductoisomerase; Class I ketol-acid reductoisomerase (KARI)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.16785883389468 bayes_pls_golite062009
oxidoreductase activity 1.95477050413 bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors 0.771153340292 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 0.66554302844944 bayes_pls_golite062009
ketol-acid reductoisomerase activity 0.57325534211306 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle