| Protein: | EIF3B_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 712 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EIF3B_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
454.0 | [0..43] | [701..1152] |
|
Region A: Residues: [1-102] |
1 11 21 31 41 51
| | | | | |
1 MEVVDIDARA AKLGIDWSQV NFDSIQLPPG EDFGIESDDE AVYQDDQSEF DTGFGNIIVV 60
61 DHLPVVPKEK FEKLEGVVKK IYNQLGVIKE NGLWMPVDPD TK
|
| Detection Method: |  |
| Confidence: | 2.08 |
| Match: | 2nlwA |
| Description: | No description for 2nlwA was found. |
|
Region A: Residues: [103-630] |
1 11 21 31 41 51
| | | | | |
1 MTLGYCFIEF NTPQEAQNAK EKSHGYKLDK SHIFAVNMFD DFDRLMNVKE EWEPPQARPY 60
61 VPGENLQKWL TDEKARDQLV IRSGPDTEVF WNDTRQKAPE PVHKRPYWTE SYVQWSPLGT 120
121 YLVTLHKQGA AVWGGADTFT RLMRYQHSMV KLVDFSPGEK YLVTYHSQEP SNPRDASKVE 180
181 IKVFDVRTGR MMRDFKGSAD EFSIGGPGGV AGASWPVFRW AGGKDDKYFA KLSKNTISVY 240
241 ETETFSLIDK KSMKVDNVVD ICWSPTDSIL SLFVPEQGGG NQPAKVALVQ IPSKVELRQK 300
301 NLFSVSDCKM YWQSSGEYLA VKVDRYTKTK KSTYSGFELF RIKERDIPIE VLELDNKNDK 360
361 IIAFAWEPKG HRFAVIHGDQ PRPDVSFYSM KTAQNTGRVS KLATLKAKQA NALFWSPTGK 420
421 YIILAGLKGF NGQLEFFNVD ELETMATAEH FMATDIEWDP TGRYVATAVT SVHEMENGFT 480
481 IWSFNGIMLY RILKDHFFQL AWRPRPPSFL TAEKEEEIAK TLKKYSKK
|
| Detection Method: | |
| Confidence: | 27.522879 |
| Match: | 1pguA |
| Description: | Actin interacting protein 1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| structural molecule activity | 2.6914565031145 | bayes_pls_golite062009 |
| translation initiation factor activity | 2.29806492548141 | bayes_pls_golite062009 |
| binding | 1.58733371663063 | bayes_pls_golite062009 |
| RNA binding | 1.54614730254863 | bayes_pls_golite062009 |
| 1.53488375271101 | bayes_pls_golite062009 | |
| protein binding | 1.11897341394404 | bayes_pls_golite062009 |
| snoRNA binding | 0.503568445551651 | bayes_pls_golite062009 |
| nucleic acid binding | 0.417970425588631 | bayes_pls_golite062009 |
|
Region A: Residues: [631-712] |
1 11 21 31 41 51
| | | | | |
1 YEAEDQDVSL LLSEQDREKR KALKEEWEKW VMQWKSLHEE EKLVRQNLRD GEVSDVEEDE 60
61 YEAKEVEFED LIDVTEEIVQ ES
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
