| Protein: | gi|151942894 |
| Organism: | Saccharomyces cerevisiae YJM789 |
| Length: | 2489 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|151942894.
| Description | E-value | Query Range |
Subject Range |
|
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0.0 | [792..2427] | [807..2561] |
|
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0.0 | [808..2466] | [940..2817] |
|
|
0.0 | [1..2489] | [1..2489] |
|
|
0.0 | [744..1448] | [762..1373] |
|
|
0.0 | [825..1439] | [145..681] |
|
|
0.0 | [825..1439] | [59..595] |
|
|
0.0 | [734..1431] | [802..1505] |
|
Region A: Residues: [1-739] |
1 11 21 31 41 51
| | | | | |
1 MSMLPWSQIR DVSKLLLGFM LFIISIQKIA SILMSWILML RHSTIRKISF GYFFGTSIRR 60
61 AFILTDFAQI YIGKITLRIG WKPGIVFHNV DLKLFGKDSH ITAHSTKDSR TYFNPRDQTF 120
121 TFVINRRVLS ILKLVFSFST FFHTLALTVP NGKQYKLNIG SITISHPHDD TIKLEAFLHD 180
181 FTHPETKDTL NHTGFFMVCK IGKEDDTGSN CTKVILKNWK SSLKISDVCW HLPEKKGKNL 240
241 HSEPVEPFSA GDDAEMLTSY RKMLKPFHYP LKTLNILDLK VENVKLIYKK KFTIRISSAQ 300
301 LYLESISILN NVSALELLPL NKPTWGDFEL SLSANAVVVD IDGNTAVRIP FGNVILTSDI 360
361 LLFLLDNVPL RRTKVSSILN IINPSVFLTI HQVLEVLHLV DKFDSPETSS CTNTNDRSLN 420
421 ILDLDIDRLP SFNFELLMSN FISRLHISDE ENVTFKVFST HALFSRNNLS MTPKKGQVMQ 480
481 IRPDWPFAKT ALVSDQLSNY IKIVGTSLSY LRIPTEQDAN PVSIPVCGFE RLDTFLDEFS 540
541 NSKLIVQSTL RHSYVSLENI EVLHTLSRAF DKIYLLISSR TKRNAAHKAN GGKLGDLNEA 600
601 KKTFNWSLKL RMKDISCSLL VAGFLPKNLD PVEAENFNLS DVTRGAKVVF TESILLADSQ 660
661 EKNFTIIDAS VYRFMDGTTY KPSPEVIIQF TNLLLSFNDS DEIHFSLPKI KFKMDVNIIW 720
721 LWFYIRSIWI KFRPNSKLS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [740-1475] |
1 11 21 31 41 51
| | | | | |
1 RNSVSSVKSV NVLDRLRVDI GKMIIELTLP HNTEVLLIFE RIGLSSSTKN LTIASLSAYV 60
61 VSVYVKHIKV YVSLLNINDF ELDTEELICK KSAVINTSLI HFHAEYHFRF YMITDNIVTL 120
121 YKSFKQIKLA FSNLNEFKRL YPQQQFPKKV PNLHICCQDF LIDIEEDPFE QELGLILKVG 180
181 VLEQRERLKK LEEFKEKLST YEDMNVRLRS LYDTSRGQSF FPEFYANDQE YEQKAYLRLL 240
241 ENFSTSWIAR YRKAKLSFYG MPYRVISREE LGTKYHLFTR QKTSTVANLV VKDLDFKLGS 300
301 PSFPLDNYMD FVYQYGKKVP KSTEYTLLII LGLKIKSALW ELRLRDYPIP AISFPDTFTT 360
361 GDVVFAEKMP APCALHTVYV PFVSSAQRSP YNDANTIYGL HIIRTINSVK TYFNIRSMVT 420
421 SSSSARITWG KSLQPGYESL MLWFDFLTKP LIDPSKKLGF WDKFRYLVHG KWIYEFSEES 480
481 EIHLNIKGSH DPYKITDDGA GLAFCWSGGT TIYVHNSTDP KEFLKIESQR FQLAVPDFAK 540
541 VSKFDKVFMK LDGRVIWTLG LLFEQGDISK AGDEERFLPN RPHYEIQLMN PDGVADLDHH 600
601 DTYKGFRTSF IHMSFGVYSS EHGSINSLYL APYALTHFFK WWNLFHTYTS GPIRQGRLFT 660
661 DVLQNKTKFG RSLFTIAYQL HLKRLMVTHI YRHITTQYDL EKDRKITFTG LKGRFDSLKI 720
721 DLHQKRVKLT HTNQKL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1476-1700] |
1 11 21 31 41 51
| | | | | |
1 NKSKPVWKFK MSRGEIDCAE ADIRILSTLF DQEAVKEILT SGLDGILEDE PSRPITPQDV 60
61 EYLRESDWYD YEDYIDLNQV PLGSSLPLKL EAIPLLYSPR ISYFRKINDD GYVLAYPFGT 120
121 EESHNCLIGK NHPELTQEKL ATERKREIEE QLKLLHITLS ELQSNKGGGS VSGNSERYAR 180
181 ELKAEVAELN HRLHTVNTIL SDLKISETIP GGNTDGDSSS SLSDT
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1701-1935] |
1 11 21 31 41 51
| | | | | |
1 DVNLENAPPI QNRISLLRTN TVESFVSMRK ASTMQVESTY DNRFMVHNIE LKIDNKIRHH 60
61 LLEYASSAFE RKSMRFAVTY KSVTILKELL GNVLTGVRTS VEDYGSILED DLASNSEFIE 120
121 HFEKLIREVP SDDFDYVDNY LFRLISPQVQ IKSDVERNAA VILAARDIEM GIIDIVQVYG 180
181 KSGKRIPVDV DTIVETRYSA VSKDIQLFTL FKKDLEGPEG RFFHKNGYGS DKESD
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1936-2437] |
1 11 21 31 41 51
| | | | | |
1 IWPPWIPLEM CFDGSLLDKH VFLKRRSMFL TYVAPNPLFF SANDTSAFSY DSRFRIAFPG 60
61 LVLTSDCQQY CAVYAIAEDL LSFGSSLDEK VEKLSRILFT DEVRNNLENL DVSVVTALQE 120
121 RIKELYYTRA YLKLHEPRLF MKSGQELTFD IQTSTLKLTL LMTAIKKTYD RMGSGNRVIQ 180
181 KRLRWQVGTD ELIWELYDES KTPFVTIGLG PSTFIRSETS DGTNSNKVSI SSLQCFNQQE 240
241 NPVYTELLAP FYENSSYNKN APMVEIFWIL GPSVGGISDL QDLIVSLQPL IFKMDHKTSE 300
301 KLMNYLFPKI EQTSIEPNSP ELVPRSSTSS FFSSSPVLRH SLSNGSLSVY DAKDVDSWDL 360
361 RSIQSKEGIK KHKGDHRKLS ASLFVQPDYN INEMVKRSGT FFNVKSIIIR KTLMSVCYKG 420
421 SHSLLTDVNN LIVRVPVLKY HNKLWSREEF FTALKRDVVR IVLQHLGNII GNKFLPHKKE 480
481 NKKKTSMEIH RLLSPDSQNR DN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [2438-2489] |
1 11 21 31 41 51
| | | | | |
1 SHILEVEGHN SFYSSTHSSD IRSINSDETY NENDGNGVKP FYPVTSEFSK NK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.763 | a.60.12 | DNA polymerase beta-like, second domain |
| View | Download | 0.572 | d.15.10 | TGS-like |
|
Region A: Residues: [986-1062] |
1 11 21 31 41 51
| | | | | |
1 WIARYRKAKL SFYGMPYRVI SREELGTKYH LFTRQKTSTV ANLVVKDLDF KLGSPSFPLD 60
61 NYMDFVYQYG KKVPKST
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1063-1831] |
1 11 21 31 41 51
| | | | | |
1 EYTLLIILGL KIKSALWELR LRDYPIPAIS FPDTFTTGDV VFAEKMPAPC ALHTVYVPFV 60
61 SSAQRSPYND ANTIYGLHII RTINSVKTYF NIRSMVTSSS SARITWGKSL QPGYESLMLW 120
121 FDFLTKPLID PSKKLGFWDK FRYLVHGKWI YEFSEESEIH LNIKGSHDPY KITDDGAGLA 180
181 FCWSGGTTIY VHNSTDPKEF LKIESQRFQL AVPDFAKVSK FDKVFMKLDG RVIWTLGLLF 240
241 EQGDISKAGD EERFLPNRPH YEIQLMNPDG VADLDHHDTY KGFRTSFIHM SFGVYSSEHG 300
301 SINSLYLAPY ALTHFFKWWN LFHTYTSGPI RQGRLFTDVL QNKTKFGRSL FTIAYQLHLK 360
361 RLMVTHIYRH ITTQYDLEKD RKITFTGLKG RFDSLKIDLH QKRVKLTHTN QKLNKSKPVW 420
421 KFKMSRGEID CAEADIRILS TLFDQEAVKE ILTSGLDGIL EDEPSRPITP QDVEYLRESD 480
481 WYDYEDYIDL NQVPLGSSLP LKLEAIPLLY SPRISYFRKI NDDGYVLAYP FGTEESHNCL 540
541 IGKNHPELTQ EKLATERKRE IEEQLKLLHI TLSELQSNKG GGSVSGNSER YARELKAEVA 600
601 ELNHRLHTVN TILSDLKISE TIPGGNTDGD SSSSLSDTDV NLENAPPIQN RISLLRTNTV 660
661 ESFVSMRKAS TMQVESTYDN RFMVHNIELK IDNKIRHHLL EYASSAFERK SMRFAVTYKS 720
721 VTILKELLGN VLTGVRTSVE DYGSILEDDL ASNSEFIEHF EKLIREVPS
|
| Detection Method: | |
| Confidence: | 1.02 |
| Match: | 1dg3A |
| Description: | Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain; Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.301700930786307 | bayes_pls_golite062009 |
| catalytic activity | 0.176212702885001 | bayes_pls_golite062009 |
|
Region A: Residues: [1832-2109] |
1 11 21 31 41 51
| | | | | |
1 DDFDYVDNYL FRLISPQVQI KSDVERNAAV ILAARDIEMG IIDIVQVYGK SGKRIPVDVD 60
61 TIVETRYSAV SKDIQLFTLF KKDLEGPEGR FFHKNGYGSD KESDIWPPWI PLEMCFDGSL 120
121 LDKHVFLKRR SMFLTYVAPN PLFFSANDTS AFSYDSRFRI AFPGLVLTSD CQQYCAVYAI 180
181 AEDLLSFGSS LDEKVEKLSR ILFTDEVRNN LENLDVSVVT ALQERIKELY YTRAYLKLHE 240
241 PRLFMKSGQE LTFDIQTSTL KLTLLMTAIK KTYDRMGS
|
| Detection Method: | |
| Confidence: | 1.32 |
| Match: | 2oevA |
| Description: | No description for 2oevA was found. |
|
Region A: Residues: [2110-2252] |
1 11 21 31 41 51
| | | | | |
1 GNRVIQKRLR WQVGTDELIW ELYDESKTPF VTIGLGPSTF IRSETSDGTN SNKVSISSLQ 60
61 CFNQQENPVY TELLAPFYEN SSYNKNAPMV EIFWILGPSV GGISDLQDLI VSLQPLIFKM 120
121 DHKTSEKLMN YLFPKIEQTS IEP
|
| Detection Method: | |
| Confidence: | 1.32 |
| Match: | 1yvlA |
| Description: | Structure of Unphosphorylated STAT1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [2253-2318] |
1 11 21 31 41 51
| | | | | |
1 NSPELVPRSS TSSFFSSSPV LRHSLSNGSL SVYDAKDVDS WDLRSIQSKE GIKKHKGDHR 60
61 KLSASL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [2319-2489] |
1 11 21 31 41 51
| | | | | |
1 FVQPDYNINE MVKRSGTFFN VKSIIIRKTL MSVCYKGSHS LLTDVNNLIV RVPVLKYHNK 60
61 LWSREEFFTA LKRDVVRIVL QHLGNIIGNK FLPHKKENKK KTSMEIHRLL SPDSQNRDNS 120
121 HILEVEGHNS FYSSTHSSDI RSINSDETYN ENDGNGVKPF YPVTSEFSKN K
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
