| Protein: | RU1C_RAT |
| Organism: | Rattus norvegicus |
| Length: | 159 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RU1C_RAT.
| Description | E-value | Query Range |
Subject Range |
|
|
138.0 | [0..1] | [159..166] |
|
|
135.0 | [0..32] | [155..708] |
|
|
134.0 | [0..1] | [77..1] |
|
|
134.0 | [0..32] | [155..705] |
|
|
133.0 | [0..32] | [155..705] |
|
|
132.0 | [0..44] | [157..710] |
|
Region A: Residues: [1-61] |
1 11 21 31 41 51
| | | | | |
1 MPKFYCDYCD TYLTHDSPSV RKTHCSGRKH KENVKDYYQK WMEEQAQSLI DKTTAAFQQG 60
61 K
|
| Detection Method: |  |
| Confidence: | 31.30103 |
| Match: | 1uw2A |
| Description: | The structure of the zinc finger from the human spliceosomal protein U1C |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.414217765611205 | bayes_pls_golite062009 |
|
Region A: Residues: [62-159] |
1 11 21 31 41 51
| | | | | |
1 IPPAPFSAPP PAGAMIPPPP SLPGPPRPGM MPAPHMGGPP MMPMMGPPPP GMMPVGPAPG 60
61 MRPPMGGHMP MMPGPPMMRP PARPMMVPTR PGMTRPDR
|
| Detection Method: | |
| Confidence: | 1.28 |
| Match: | 1pk8A |
| Description: | Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP |
Matching Structure (courtesy of the PDB): |
|
