| Protein: | gi|151946306 |
| Organism: | Saccharomyces cerevisiae YJM789 |
| Length: | 220 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|151946306.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..220] | [1..220] |
|
|
0.0 | [1..220] | [1..220] |
|
|
0.001 | [11..73] | [5..64] |
|
Region A: Residues: [1-83] |
1 11 21 31 41 51
| | | | | |
1 MASRVDETTV PSYYYYVDPE TTYTYQQPNP LQDLISVYGL DDISRQVART NLDGTKAVKL 60
61 RKSYKNQIAD LSGKFSTIPT REN
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.430 | 0.830 | transcription from RNA polymerase II promoter | a.4.1 | Homeodomain-like |
| View | Download | 0.404 | 0.117 | transcription from RNA polymerase II promoter | a.39.1 | EF-hand |
| View | Download | 0.616 | 0.001 | transcription from RNA polymerase II promoter | a.77.1 | DEATH domain |
| View | Download | 0.468 | 0.001 | transcription from RNA polymerase II promoter | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.372 | N/A | N/A | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.353 | N/A | N/A | d.188.1 | Prokaryotic ribosomal protein L17 |
| View | Download | 0.332 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.322 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.313 | N/A | N/A | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.296 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.282 | N/A | N/A | a.60.8 | HRDC-like |
| View | Download | 0.271 | N/A | N/A | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.268 | N/A | N/A | a.4.8 | Ribosomal protein S18 |
| View | Download | 0.265 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.265 | N/A | N/A | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.262 | N/A | N/A | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.261 | N/A | N/A | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.258 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.257 | N/A | N/A | a.60.8 | HRDC-like |
| View | Download | 0.257 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.256 | N/A | N/A | a.65.1 | Annexin |
| View | Download | 0.255 | N/A | N/A | a.17.1 | p8-MTCP1 |
| View | Download | 0.250 | N/A | N/A | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.248 | N/A | N/A | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.247 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.247 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.244 | N/A | N/A | a.60.8 | HRDC-like |
| View | Download | 0.243 | N/A | N/A | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.234 | N/A | N/A | a.60.1 | SAM/Pointed domain |
| View | Download | 0.228 | N/A | N/A | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.225 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.224 | N/A | N/A | a.4.8 | Ribosomal protein S18 |
| View | Download | 0.220 | N/A | N/A | a.60.2 | RuvA domain 2-like |
| View | Download | 0.217 | N/A | N/A | a.4.3 | ARID-like |
| View | Download | 0.217 | N/A | N/A | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.214 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.213 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.212 | N/A | N/A | a.4.12 | TrpR-like |
| View | Download | 0.212 | N/A | N/A | a.60.2 | RuvA domain 2-like |
| View | Download | 0.207 | N/A | N/A | d.188.1 | Prokaryotic ribosomal protein L17 |
| View | Download | 0.207 | N/A | N/A | a.101.1 | Uteroglobin-like |
| View | Download | 0.207 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.206 | N/A | N/A | a.4.8 | Ribosomal protein S18 |
| View | Download | 0.205 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.204 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.203 | N/A | N/A | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.203 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
|
Region A: Residues: [84-220] |
1 11 21 31 41 51
| | | | | |
1 GKGGQIAHIL FQNNPDMMIQ PPQQGQNMSE QQWREQLRNR DIALFQPPNF DWDLCSSVLS 60
61 QFERSYPSEF ANQNQGGAQA PFDIDDLAFD LDGTGKSQSG SNSGNNSKKR KNKSSGSSMA 120
121 TPTHSDSHED MKRRRLE
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.600 | c.10.1 | RNI-like |
