Protein: | gi|151941280 |
Organism: | Saccharomyces cerevisiae YJM789 |
Length: | 859 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|151941280.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..859] | [1..859] |
|
0.0 | [1..859] | [1..782] |
|
0.0 | [1..859] | [1..782] |
|
0.0 | [1..856] | [1..736] |
|
0.0 | [1..859] | [1..765] |
|
0.0 | [1..858] | [1..842] |
|
0.0 | [220..859] | [6..579] |
|
0.0 | [3..859] | [2..797] |
Region A: Residues: [1-273] |
1 11 21 31 41 51 | | | | | | 1 MTYKYNCCDD GSGTTVGSVV RFDNVTLLID PGWNPSKVSY EQCIKYWEKV IPEIDVIILS 60 61 QPTIECLGAH SLLYYNFTSH FISRIQVYAT LPVINLGRVS TIDSYASAGV IGPYDTNKLD 120 121 LEDIEISFDH IVPLKYSQLV DLRSRYDGLT LLAYNAGVCP GGSIWCISTY SEKLVYAKRW 180 181 NHTRDNILNA ASILDATGKP LSTLMRPSAI ITTLDRFGSS QPFKKRSKIF KDTLKKGLSS 240 241 DGSVIIPVDM SGKFLDLFTQ VHELLFESTK INA |
Detection Method: | |
Confidence: | 10.69897 |
Match: | 1e5dA_ |
Description: | Rubredoxin oxygen:oxidoreductase (ROO), C-terminal domain; Rubredoxin oxygen:oxidoreductase (ROO), N-terminal domain |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 1.97803450114143 | bayes_pls_golite062009 |
nucleic acid binding | 1.66507162669272 | bayes_pls_golite062009 |
RNA binding | 1.48455378212673 | bayes_pls_golite062009 |
catalytic activity | 0.941400907161877 | bayes_pls_golite062009 |
protein binding | 0.380466845099285 | bayes_pls_golite062009 |
Region A: Residues: [274-481] |
1 11 21 31 41 51 | | | | | | 1 HTQVPVLILS YARGRTLTYA KSMLEWLSPS LLKTWENRNN TSPFEIGSRI KIIAPNELSK 60 61 YPGSKICFVS EVGALINEVI IKVGNSEKTT LILTKPSFEC ASSLDKILEI VEQDERNWKT 120 121 FPEDGKSFLC DNYISIDTIK EEPLSKEETE AFKVQLKEKK RDRNKKILLV KRESKKLANG 180 181 NAIIDDTNGE RAMRNQDILV ENVNGVPP |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.781 | N/A | N/A | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
View | Download | 0.765 | N/A | N/A | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
View | Download | 0.594 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
View | Download | 0.580 | N/A | N/A | b.1.1 | Immunoglobulin |
View | Download | 0.568 | N/A | N/A | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
Region A: Residues: [482-859] |
1 11 21 31 41 51 | | | | | | 1 IDHIMGGDED DDEEEENDNL LNLLKDNSEK SAAKKNTEVP VDIIIQPSAA SKHKMFPFNP 60 61 AKIKKDDYGT VVDFTMFLPD DSDNVNQNSR KRPLKDGAKT TSPVNEEDNK NEEEDGYNMS 120 121 DPISKRSKHR ASRYSGFSGT GEAENFDNLD YLKIDKTLSK RTISTVNVQL KCSVVILNLQ 180 181 SLVDQRSASI IWPSLKSRKI VLSAPKQIQN EEITAKLIKK NIEVVNMPLN KIVEFSTTIK 240 241 TLDISIDSNL DNLLKWQRIS DSYTVATVVG RLVKESLPQV NNHQKTASRS KLVLKPLHGS 300 301 SRSHKTGALS IGDVRLAQLK KLLTEKNYIA EFKGEGTLVI NEKVAVRKIN DAETIIDGTP 360 361 SELFDTVKKL VTDMLAKI |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.