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View Structure Prediction Details

Protein: EFTS_PHOLL
Organism: Photorhabdus luminescens subsp. laumondii
Length: 283 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EFTS_PHOLL.

Description E-value Query
Range
Subject
Range
EFTS_SODGM - Elongation factor Ts OS=Sodalis glossinidius (strain morsitans) GN=tsf PE=3 SV=1
380.0 [0..1] [283..1]

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Predicted Domain #1
Region A:
Residues: [1-283]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGITAALVK ELRERTGAGM MECKKALVEA NGDIELAIDN MRKSGQAKAA KKAGRVAAEG  60
   61 IILAEVAADG KFGALVELNC ETDFVAKDAG FIAFGKEVMA TVLADKISDI ETLKAKFEEQ 120
  121 RTALVAKIGE NINIRRVSVL EGEQLGTYLH GARIGVLVAA EGANEELIKH VAMHIAASKP 180
  181 EYVNPSDVPA DVVDREHQIQ LDIAMQSGKP REIAEKMVSG RMNKFTGEIS LTGQNFVMDP 240
  241 SKTVGDLLKE NNATVTSFIR YEVGEGIEKV ETDFAAEVAA MSK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 101.0
Match: 1efuB
Description: Elongation factor Ts (EF-Ts), N-terminal domain; Elongation factor Ts (EF-Ts), dimerisation domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
translation elongation factor activity 7.45583793023677 bayes_pls_golite062009
translation regulator activity 3.96278094372195 bayes_pls_golite062009
translation factor activity, nucleic acid binding 3.9473033844258 bayes_pls_golite062009
nucleic acid binding 3.82932150818666 bayes_pls_golite062009
binding 3.42735689097363 bayes_pls_golite062009
transcription regulator activity 1.03112855383055 bayes_pls_golite062009
DNA binding 0.853492612495239 bayes_pls_golite062009
ubiquitin binding 0.83381750627184 bayes_pls_golite062009
small conjugating protein binding 0.643709242447801 bayes_pls_golite062009
protein binding 0.259532204752794 bayes_pls_golite062009
catalytic activity 0.25774924710417 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle