YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ARGC_ECOLI
Organism: Escherichia coli
Length: 334 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARGC_ECOLI.

Description E-value Query
Range
Subject
Range
G3P_CRIGR - Glyceraldehyde-3-phosphate dehydrogenase OS=Cricetulus griseus GN=GAPDH PE=2 SV=2
326.0 [0..1] [325..1]
gi|62318276 - gi|62318276|dbj|BAD93764.1| Glyceraldehyde-3-phosphate dehydrogenase [Meriones unguiculatus]
325.0 [0..1] [325..1]
G3P_MOUSE - Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus GN=Gapdh PE=1 SV=2
324.0 [0..1] [325..1]
G3P_COTJA - Glyceraldehyde-3-phosphate dehydrogenase OS=Coturnix coturnix japonica GN=GAPDH PE=2 SV=2
gi|62616, gi|484434 - gi|62616|emb|CAA79512.1| glyceraldehydephosphate dehydrogenase [Coturnix coturnix], gi|484434|pir||J...
322.0 [0..1] [325..1]
G3P_RAT - Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus GN=Gapdh PE=1 SV=3
321.0 [0..1] [325..1]

Back

Predicted Domain #1
Region A:
Residues: [1-334]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNTLIVGAS GYAGAELVTY VNRHPHMNIT ALTVSAQSND AGKLISDLHP QLKGIVDLPL  60
   61 QPMSDISEFS PGVDVVFLAT AHEVSHDLAP QFLEAGCVVF DLSGAFRVND ATFYEKYYGF 120
  121 THQYPELLEQ AAYGLAEWCG NKLKEANLIA VPGCYPTAAQ LALKPLIDAD LLDLNQWPVI 180
  181 NATSGVSGAG RKAAISNSFC EVSLQPYGVF THRHQPEIAT HLGADVIFTP HLGNFPRGIL 240
  241 ETITCRLKSG VTQAQVAQVL QQAYAHKPLV RLYDKGVPAL KNVVGLPFCD IGFAVQGEHL 300
  301 IIVATEDNLL KGAAAQAVQC ANIRFGYAET QSLI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 80.522879
Match: 2g17A
Description: No description for 2g17A was found.

Predicted functions:

Term Confidence Notes
catalytic activity 2.91887313269429 bayes_pls_golite062009
oxidoreductase activity 2.86254373278283 bayes_pls_golite062009
N-acetyl-gamma-glutamyl-phosphate reductase activity 2.45675651773071 bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors 1.19591951564949 bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor 1.07932840802619 bayes_pls_golite062009
aspartate-semialdehyde dehydrogenase activity 0.70952847714012 bayes_pls_golite062009
dihydrodipicolinate reductase activity 0.39721587842232 bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors 0.23458869447046 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 0.22262673350502 bayes_pls_golite062009
glyceraldehyde-3-phosphate dehydrogenase activity 0.0876163188309598 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle