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View Structure Prediction Details

Protein: CE36342
Organism: Caenorhabditis elegans
Length: 139 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36342.

Description E-value Query
Range
Subject
Range
gi|118778436, gi... - gi|118778436|ref|XP_308641.3| ENSANGP00000011253 [Anopheles gambiae str. PEST], gi|116132383|gb|EAA0...
203.0 [0..2] [138..16]

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Predicted Domain #1
Region A:
Residues: [1-139]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTVGSQNAL KFLVVLKPEI VAHRVLAQVA LSELRSNGIE IEEMRQMKIS GSLAKQLYAQ  60
   61 HQGKFFYDRL VRHISSGPVI AMRVSGNARK CIGSSRLWPR LEPTVQPIRQ RFALSDVRNV 120
  121 AHASDEDAAE KELQLFELI

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Detection Method: PSI-BLAST
Confidence: 51.69897
Match: 1nueA
Description: Nucleoside diphosphate kinases
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
nucleobase, nucleoside, nucleotide kinase activity 9.54806938681864 bayes_pls_golite062009
phosphotransferase activity, phosphate group as acceptor 8.99343206813136 bayes_pls_golite062009
nucleoside diphosphate kinase activity 6.52969807133917 bayes_pls_golite062009
kinase activity 4.47863955552135 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 4.12101281221004 bayes_pls_golite062009
transferase activity 3.18933364281698 bayes_pls_golite062009
catalytic activity 1.54275558650196 bayes_pls_golite062009
binding 1.2182365290897 bayes_pls_golite062009
nucleic acid binding 0.713598172823663 bayes_pls_golite062009
DNA binding 0.572491426720989 bayes_pls_golite062009
transcription regulator activity 0.533689922981176 bayes_pls_golite062009
ATP binding 0.296155558255259 bayes_pls_golite062009
adenyl ribonucleotide binding 0.266605667826092 bayes_pls_golite062009
adenyl nucleotide binding 0.257562462657248 bayes_pls_golite062009
ribonucleotide binding 0.220785231474163 bayes_pls_golite062009
purine ribonucleotide binding 0.218110594604803 bayes_pls_golite062009
purine nucleotide binding 0.215356018140055 bayes_pls_golite062009
nucleotide binding 0.213942742376379 bayes_pls_golite062009
protein binding 0.139221571704566 bayes_pls_golite062009

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