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View Structure Prediction Details

Protein: bre-2
Organism: Caenorhabditis elegans
Length: 308 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for bre-2.

Description E-value Query
Range
Subject
Range
gi|62088614 - gi|62088614|dbj|BAD92754.1| beta-1,3-N-acetylglucosaminyltransferase bGnT-5 variant [Homo sapiens]
260.0 [0..1] [308..3]

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Predicted Domain #1
Region A:
Residues: [1-83]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQSRRASSR VNRLVVIFII VASGFLLLYK NTQQFTQIDR ECIQDEWQEN NNLGNTIDDG  60
   61 SNFRIAFTDI QQNYTWLHLP NFL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [84-308]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ENSEILMIVS SNCDNFARRN ILRKTWMNPE NSQIIGDGRM KALFLVGING ADEKLNAVVL  60
   61 EEAKVFGDMI VIDLEDNYLN LSYKTISLLL YSISKTKSPN LIGKIDEDVL FYPDQLTPLI 120
  121 NDKTINTSTF SIYGEKYEAG VAVNHGEDNA KWQISKNSFK CSVYPSYLSG PTYFLTRKAA 180
  181 KRIVEATKHR KFISVDVEKL LKMCSLLACL PATLGSKKIN FHLCI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.0
Match: 2j0aA
Description: No description for 2j0aA was found.

YRC Informatics Platform - Version 3.0
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