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View Structure Prediction Details

Protein: bre-2
Organism: Caenorhabditis elegans
Length: 308 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for bre-2.

Description E-value Query
Range
Subject
Range
gi|62088614 - gi|62088614|dbj|BAD92754.1| beta-1,3-N-acetylglucosaminyltransferase bGnT-5 variant [Homo sapiens]
260.0 [0..1] [308..3]

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Predicted Domain #1
Region A:
Residues: [1-83]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQSRRASSR VNRLVVIFII VASGFLLLYK NTQQFTQIDR ECIQDEWQEN NNLGNTIDDG  60
   61 SNFRIAFTDI QQNYTWLHLP NFL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [84-308]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ENSEILMIVS SNCDNFARRN ILRKTWMNPE NSQIIGDGRM KALFLVGING ADEKLNAVVL  60
   61 EEAKVFGDMI VIDLEDNYLN LSYKTISLLL YSISKTKSPN LIGKIDEDVL FYPDQLTPLI 120
  121 NDKTINTSTF SIYGEKYEAG VAVNHGEDNA KWQISKNSFK CSVYPSYLSG PTYFLTRKAA 180
  181 KRIVEATKHR KFISVDVEKL LKMCSLLACL PATLGSKKIN FHLCI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.0
Match: 2j0aA
Description: No description for 2j0aA was found.

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