| Protein: | fpn-1.1 |
| Organism: | Caenorhabditis elegans |
| Length: | 509 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fpn-1.1.
| Description | E-value | Query Range |
Subject Range |
|
|
197.0 | [0..6] | [384..1380] |
|
Region A: Residues: [1-405] |
1 11 21 31 41 51
| | | | | |
1 MAWLSGKELQ LNSAFLLTTL GDRMWAFVIG LFMHQLGGMT WVAVQQLVDS VLKLVVITIV 60
61 GQYLDKIDRS KIIQRTLLLN NAAVAVSAGL FAYMFVHKTD HYATPVLLMA SAVASIAKVA 120
121 SEIQRISFTK DWVVVISQSE SVDLAKVNSI LLCIDQISSA ILPTLTGELL DTFKWQYVCG 180
181 FIIVYNLASW VIESMILRRL YNETPQLKTR ASEITGDEEL RGLKGVKLNS ITQYFKQQSW 240
241 TAGFGLSLLY MTVLGFDNLA ASYGQKHGLS ASYIGVLRGF GSALGVIGTF SFQFVAKRFG 300
301 LLWTVMIGLV WQNIFIEMCG VSVLLPGSSM DVSGYIANTS VSEWSKEVLS RVSNPEPQNV 360
361 PSVSFYDVAL PVNLFFIGIS FARFGLWLAD PAITQIQQET IPESQ
|
| Detection Method: |  |
| Confidence: | 21.522879 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| substrate-specific transmembrane transporter activity | 5.46247398538901 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 4.58978526526921 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 4.31967711223954 | bayes_pls_golite062009 |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| binding | 1.26757615356623 | bayes_pls_golite062009 |
| anion transmembrane transporter activity | 1.24023641504332 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| inorganic anion transmembrane transporter activity | 0.05725800478022 | bayes_pls_golite062009 |
|
Region A: Residues: [406-509] |
1 11 21 31 41 51
| | | | | |
1 RYMAFTVQIA LNEVFSILKD IIVIMFPFTP LFGVLTLGSC VFVFTGFMFN VFYHAQCGFS 60
61 CVNKNMHLGR QPVCEMATLS SPEKQSLMGD EKEKPKVLDS PTFE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
