| Protein: | spd-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 529 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for spd-1.
| Description | E-value | Query Range |
Subject Range |
|
|
159.0 | [0..2] | [485..187] |
|
Region A: Residues: [1-153] |
1 11 21 31 41 51
| | | | | |
1 MSRRHSVVDA YSTVEGKIRD TMRELSALWD EVDMSEAMRL KRVDNAFTHI TLLCDDMLSG 60
61 EKEMIHNLKV SIREDMQNVK KMRLELEMED FQRPAEIKDG SIALMRHLQS EVKSLETEFQ 120
121 TRHEDQRVLI EKICNLKKRL ESDFEFEYEI HAL
|
| Detection Method: |  |
| Confidence: | 4.69897 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
|
Region A: Residues: [154-529] |
1 11 21 31 41 51
| | | | | |
1 FPVKAFEKYS ASCSEMEELL KHRYHQIERL QTDISQWKSM AQNVADYIGG DDDLKNLLEK 60
61 NIDSPEFVFS ERLLDSLQSY HSELEPLYKH WLEDIEFRWT EKHQQLQELW EKCLVSEADR 120
121 HYSPIFEPTK NSEQTLKRME DECDRLEKKY EACRIVFELV DKWRAVWTEK LTIDEKRKQP 180
181 NYYKTTNVLP DNKRERELLN QMPVLERKID SAHRKYGNEH DGEQISIQGM APLEYVRFVQ 240
241 EEHKRELKFE LQLKKEEKTR MQSPTPTRTP RTQKRAMFRT PMSTAKMEPV AKKLNFDTDL 300
301 PPCMSPATSE MISFITPTRR QAVGPKTSSP KDTQPSTSSS SRTTTPMSKR AMTPSSIASS 360
361 TPSSAKKVLT RRNQFL
|
| Detection Method: | |
| Confidence: | 15.522879 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
