| Protein: | epc-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 795 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for epc-1.
| Description | E-value | Query Range |
Subject Range |
|
|
421.0 | [0..7] | [568..5] |
|
Region A: Residues: [1-170] |
1 11 21 31 41 51
| | | | | |
1 MATTSKAFRA RALDSNRSMT VYWGHELPDL SECSVGNRAV TQMPSGMEKE EEQEKHLQEA 60
61 IAAQQASTSG IQLNHVIPTP KVDRVEDQRY HSTYHNKNKM HRSKYIKVHA WQALERDEPE 120
121 YDYDTEDEAW LSDHTHIDPR VLEKIFDTVE SHSSETQIAS EDSVINLHKS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [171-313] |
1 11 21 31 41 51
| | | | | |
1 LDSSIVYEIY EYWLSKRTSA ATTSGCVGVG GLIPRVRTEC RKDGQGVINP YVAFRRRAEK 60
61 MQTRKNRKND EDSYEKILKL VHDMSKAQQL FDMTARREKQ KLALIDMESE ILAKRMEMSD 120
121 FGGSPSSFNE ITEKIRAAAT LEV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [314-489] |
1 11 21 31 41 51
| | | | | |
1 VKPPLAEING SDEVKKRKKP RRKIADKDLI SKAWLKKNAE SWNRPPSLFG QHSGNVPTVT 60
61 TKPVRESLAN GRFAFKRRRG CVYRAALTVY NVPTAPATVP PVQTQAAVAS SSSSKSTDMV 120
121 PSNMKFFETF VRDSQDSVSR SLGFVRRRMG RGGRVVFDRM PRNRDDNDER TSTDPW
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [490-795] |
1 11 21 31 41 51
| | | | | |
1 AEYCVADSSR TFRARNSSLG TEEETDDLSP KSLYFARSNR FAFNDDETER EWTSRCQQSS 60
61 WRDTEVDDEL KKRETTSEKF TETTTNGSTK THTESDDSEV ERMEVDDQVD EAQITVSSSK 120
121 DDGMNGNDKN EDEEDDDDDM DVDEHQTVVG VHQHQQQQHH QQKVRHQMNG GGGGGGVVKL 180
181 KPPLQELSPP LSGNGRADRA EPTPVPAKMC GTVSDSDDWR EPSGSPSESN SSTEWGGYTP 240
241 QEQHAVVVAN AVAVAFKEKL MNGVDDDDDQ QPSPARGARD HSIKDSMSTV TLLERKKFMM 300
301 PSTIGL
|
| Detection Method: | |
| Confidence: | 1.21 |
| Match: | 1h1kI |
| Description: | THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA |
Matching Structure (courtesy of the PDB): |
|
