| Protein: | sma-9 |
| Organism: | Caenorhabditis elegans |
| Length: | 537 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sma-9.
| Description | E-value | Query Range |
Subject Range |
|
|
671.0 | [0..2] | [520..365] |
|
Region A: Residues: [1-162] |
1 11 21 31 41 51
| | | | | |
1 MLKKHIKSHT DVRAFNCTAC NFSFKTKGNL TKHLSSKTHQ RRISNIQAGN DSDGTTPSTS 60
61 SMMNMDDGYH RNQPLFDDYD NNSSDEEDYD HLNRMQAEHK FKFGQEHILF ERTAHTPPTR 120
121 WCLVEAQNDH YWPSPDRRSC MSAPPVAMQR DFDDRAMTPV SG
|
| Detection Method: |  |
| Confidence: | 21.522879 |
| Match: | 2gliA |
| Description: | Five-finger GLI1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.414217765611205 | bayes_pls_golite062009 |
|
Region A: Residues: [163-297] |
1 11 21 31 41 51
| | | | | |
1 ANSPYLSQQV HSPMSTSSQS NIILDIPNNQ KSNCSSVSNV SPSNSQNFQS LSTVPTCASS 60
61 SSNVLVPNVN FLQKDETLKC DQCDRTFRKI SDLTLHQHTH NIEMQQSKNR MYQCSECKIP 120
121 IRTKAQLQKH LERNH
|
| Detection Method: | |
| Confidence: | 14.154902 |
| Match: | 2yt9A |
| Description: | No description for 2yt9A was found. |
|
Region A: Residues: [298-537] |
1 11 21 31 41 51
| | | | | |
1 GVHMDESVTA CIDPLASTQS VLGGPSTSNP RSFMCVDCDI GFRKHGILAK HLRSKTHVMK 60
61 LESLQRLPVD TLSLITKKDN GACLNDIDTT DCEKARISLL AIVEKLRNEA DKDEQGSVVP 120
121 TTSIPAPQPV ALTPEMIRAL ANAQTPVTAS MTNTPSTAQF PVGVVSTPSQ LQQLHYVAQS 180
181 NCGSTGVSNT KSVIPIGIVL NAVQKESSFG LGNTRERHAQ NNSTNLGDSV QSTSQSSTSS 240
241
|
| Detection Method: | |
| Confidence: | 57.522879 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
