| Protein: | sma-9 |
| Organism: | Caenorhabditis elegans |
| Length: | 725 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sma-9.
| Description | E-value | Query Range |
Subject Range |
|
|
292.0 | [0..2] | [719..1144] |
|
Region A: Residues: [1-295] |
1 11 21 31 41 51
| | | | | |
1 MAFAPGSGGG GAPPGQQPAQ MMMPQNISAE TYHRLNQVQR EQLNHQRLLQ AQLQTNGPGS 60
61 VSQQQQASQQ QQQVQHVQQQ QQSQQQQQQV ASQQNQPQLQ MNAQILQALS TPQGQNLVNM 120
121 LLMQQALNAQ QTDTQNPQQI MQHQLAQQQA QQAQQAQQAQ QARQQAEQQA QAQARHQAEQ 180
181 QAQQQAQQQA QARQQEQQAQ LAAIQQQVTP QQFAQILHMQ QQLQQQQFQQ QQLQQQQLQQ 240
241 QQLQQQQLQQ QQLQQQQLQQ VLQISQAQQQ AQQAQHVQSR QMQPSQQSQV QAQLQ
|
| Detection Method: |  |
| Confidence: | 18.522879 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [296-631] |
1 11 21 31 41 51
| | | | | |
1 QQQQLQQQQA QQLSQQQAQQ QQQLQQLQLQ QFLQQQQQLH QQRAAAQQAQ AQNNASQQRP 60
61 SVASTPALSS TPQLNDLTQT MQAQLQQQLL LQQQQAQAQQ AQQAQQAQLA QQAQQQQQGQ 120
121 SQNRTVSQAL QYIQSMQLQQ RADGTPNAPS LSKPLEQPSS SKAASSGNES MSDHISRIIS 180
181 ENEVILQGDP VIRKKRPYHR QIGAQSSVDH DSNSGGSTRT SPGPKDSRML QAASRSQSLF 240
241 ELSGSKHFMG SLTSGQPLLR PIQAHNDPNY TPECIYCKLT FPNEAGLQAH EVVCGKKKEL 300
301 EKAQIAQEGN PHSALKRRHT HQDATLAMHS PLAAHT
|
| Detection Method: | |
| Confidence: | 9.0 |
| Match: | 2tmaA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [632-725] |
1 11 21 31 41 51
| | | | | |
1 PSNMPGPSEP AIKLKKDDST ELDGTSKPDA LQSSSSFPRS LPKEWEQHML TLQNLAAIIP 60
61 PFVSERLYRI HTKDKTPEIK LVSIFGSFYF LILK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
