| Protein: | CE36942 |
| Organism: | Caenorhabditis elegans |
| Length: | 603 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36942.
| Description | E-value | Query Range |
Subject Range |
|
|
250.0 | [0..13] | [603..83] |
|
Region A: Residues: [1-212] |
1 11 21 31 41 51
| | | | | |
1 MADPVDIKTE TPELTPEVKE EKAIDLDRIH IKNIPTFIGF KQFKKVLEKI LGDVKSKKVR 60
61 HMSDYAYVTF ETPEDAQKAI NLVDGYDYKK FILSAQLAAT EVKSFRPANP ENTEPAQQKT 120
121 ARESVTPLAE MEYGKQLELK QQNSVGVVEK LYRQLIQNKV AHLGKQTQFR DRVLREILPA 180
181 PKTAGYRNKC EFTIGHDLNG EICVGFVGGR FS
|
| Detection Method: |  |
| Confidence: | 10.39794 |
| Match: | 1cvjA |
| Description: | Poly(A)-binding protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [213-603] |
1 11 21 31 41 51
| | | | | |
1 KNQHFVIPPV DVDIVSTQMM AIVGDVHEFV KESALEPFNE FDRKGFWRML TIREFGGDVM 60
61 LIFTVFPLED GVERMEEIQK KIETRFLDFE TFKEKKYRVC SIYWQQMVHI SDTPNFKLIG 120
121 GTPYIYESLL DCRFRVSPPA FFQTNSQAAA VLYSTIGEHC GLSEKKTNED VPVETDASEK 180
181 APEAPAAPSE PIPDDPSDAP PAKIPRIEPE PTAADEAPAP EDPGTILLDI CCGTGTIGQC 240
241 LLKNIQKSQK VCCIGIEMIA EAVEDAKQNA KQNKMETCCK YIAGKAEDTF RSMRYHLPNG 300
301 FDLRKSRVVG VLDPPRAGMH EKVILACREM ETMRRLIFVS CEPNAAISNI VNLCRPSSRK 360
361 YTGDAFSVTR VQPVDMFPQT NHMEWIIQLD R
|
| Detection Method: | |
| Confidence: | 45.39794 |
| Match: | 1uwvA |
| Description: | Crystal Structure of RumA, the iron-sulfur cluster containing E. coli 23S Ribosomal RNA 5-Methyluridine Methyltransferase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.723277178398499 | bayes_pls_golite062009 |
| transferase activity | 0.64512166557639 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 0.54403439349476 | bayes_pls_golite062009 |
| methyltransferase activity | 0.54389223881989 | bayes_pls_golite062009 |
