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View Structure Prediction Details

Protein: unc-87
Organism: Caenorhabditis elegans
Length: 544 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for unc-87.

Description E-value Query
Range
Subject
Range
unc-87 - calponin status:Confirmed UniProt:P37806 protein_id:AAC78234.1
516.0 [0..7] [544..28]

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Predicted Domain #1
Region A:
Residues: [1-191]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSSSIGPP QQQSAKLFPE HFYPSGLSPR QSEALERLRP NTASRERNIP IQFTGKNPTT  60
   61 NSALEEYKPV PHVQVTSPKS SIVPNFVSEQ RGLQPQPTSQ APTNYRQFVA APRSPRGYGD 120
  121 YPEMTGKASA AGDSEPVQIP IKTQTPITQA RAQETKIPTI VSPHPVYYYD NQEQPIQQIR 180
  181 EEQPNATMET K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.09691
Match: 1wypA
Description: Solution structure of the CH domain of human Calponin 1
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [192-285]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VTGQGQPKRV GRWTLAQLRQ TDGIIPSQAG WNKGDSQKLM TNFGTPRNTN TRVKSENLQE  60
   61 IPEDIANRTH GEVRLQSGTN KYCSQRGMTG FGSG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [286-477]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RDVCREGVRV AQNPADLAEL PEEKIRMSEG IVRLQAGTNK YDSQKGMTGF GTGRRETTKM  60
   61 VDSKHPEYDH EKPDQSEIPL QSGTNKFASQ KGMTGFGTAR RETTKMVDSN HPDYSHECSI 120
  121 DQTTIPSQMG SNQYASQKGM TGFGQPRWEV LDPSISWQNR KSQGMVRLQS GTNRFASQAG 180
  181 MIGFGTCRNT TF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.69897
Match: 1wymA
Description: Solution structure of the CH domain of human transgelin-2
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [478-544]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EAEGGELPYE AMKVSETIIP SQAGWNKGDS QKKMTSFGAP RDVKGKHLKR IWELEYPEEA  60
   61 EISLDRL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle