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View Structure Prediction Details

Protein: unc-87
Organism: Caenorhabditis elegans
Length: 544 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for unc-87.

Description E-value Query
Range
Subject
Range
unc-87 - calponin status:Confirmed UniProt:P37806 protein_id:AAC78234.1
516.0 [0..7] [544..28]

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Predicted Domain #1
Region A:
Residues: [1-191]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSSSIGPP QQQSAKLFPE HFYPSGLSPR QSEALERLRP NTASRERNIP IQFTGKNPTT  60
   61 NSALEEYKPV PHVQVTSPKS SIVPNFVSEQ RGLQPQPTSQ APTNYRQFVA APRSPRGYGD 120
  121 YPEMTGKASA AGDSEPVQIP IKTQTPITQA RAQETKIPTI VSPHPVYYYD NQEQPIQQIR 180
  181 EEQPNATMET K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.09691
Match: 1wypA
Description: Solution structure of the CH domain of human Calponin 1
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [192-285]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VTGQGQPKRV GRWTLAQLRQ TDGIIPSQAG WNKGDSQKLM TNFGTPRNTN TRVKSENLQE  60
   61 IPEDIANRTH GEVRLQSGTN KYCSQRGMTG FGSG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [286-477]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RDVCREGVRV AQNPADLAEL PEEKIRMSEG IVRLQAGTNK YDSQKGMTGF GTGRRETTKM  60
   61 VDSKHPEYDH EKPDQSEIPL QSGTNKFASQ KGMTGFGTAR RETTKMVDSN HPDYSHECSI 120
  121 DQTTIPSQMG SNQYASQKGM TGFGQPRWEV LDPSISWQNR KSQGMVRLQS GTNRFASQAG 180
  181 MIGFGTCRNT TF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.69897
Match: 1wymA
Description: Solution structure of the CH domain of human transgelin-2
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [478-544]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EAEGGELPYE AMKVSETIIP SQAGWNKGDS QKKMTSFGAP RDVKGKHLKR IWELEYPEEA  60
   61 EISLDRL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle