| Protein: | hoe-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 760 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
|
Region A: Residues: [1-412] |
1 11 21 31 41 51
| | | | | |
1 MAAVQKKQKA AHEPPANSIV NIPSQVSIEV LGNGTGLLRA CFILRTPLKT YMFNCPENAC 60
61 RFLWQLRIRS SSVVDLFITS ANWDNIAGIS SILLSKESNA LSTRLHGAMN IKHFLECIRP 120
121 FQDSDYGSCK YPSQVEERPY TMENYEDAGL KVTYIPLSPP LNIGSNNEKS KNVKVNNVDI 180
181 AFLIEMKEAA RRIDTMKLME LKVPKGPLIG KLKSGEAVTL PDGRTIQPDQ VFSSDKVEGD 240
241 KPLLLVTECT TEDHVKALID SSSLQPFLNG EKQLDYMVHI SDDAVINTPT YRHLMEKLNN 300
301 PSITHLLING GNPVIPAVES VYKHTRLLRS IAPSLFPALH PIDWSGIITQ NEELSQRQDQ 360
361 FIRVAPMQRY WMRRGASFNE EPIVNNLLAA EPELSDKAKE LIKEYQKLEK EN
|
| Detection Method: |  |
| Confidence: | 51.522879 |
| Match: | 2cbnA |
| Description: | Crystal structure of ZipD from E. coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ribonuclease activity | 1.86896377880841 | bayes_pls_golite062009 |
| binding | 1.25638799652541 | bayes_pls_golite062009 |
| 3'-tRNA processing endoribonuclease activity | 0.998280249151351 | bayes_pls_golite062009 |
| nucleic acid binding | 0.980281910076056 | bayes_pls_golite062009 |
| catalytic activity | 0.941400907161877 | bayes_pls_golite062009 |
| hydrolase activity | 0.915337370449941 | bayes_pls_golite062009 |
| RNA binding | 0.794779546418275 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.763057588327235 | bayes_pls_golite062009 |
| endoribonuclease activity | 0.364180397113473 | bayes_pls_golite062009 |
| endonuclease activity | 0.236604397004899 | bayes_pls_golite062009 |
| protein binding | 0.0732519352239051 | bayes_pls_golite062009 |
|
Region A: Residues: [413-760] |
1 11 21 31 41 51
| | | | | |
1 KMDCEFPKLT FFGTSSAVPS KYRNVTGYLV EASENSAILI DVGEGTYGQM RAVFGEDGCK 60
61 QLLVNLNCVL ITHAHQDHMN GLYTIIARRK EAFESLGAPY RPLVLVCNRN VLKPMKTYSI 120
121 CFENIEHLLE IVDISRYPLT PPGSPGGPPG KRPRLPSPHL PPSRDVLQDM SSSFDKKAWK 180
181 LDELKAVQVH HTRMANGFVM RVAGKRIVFS GDTKPCDLLV EEGKDADVLV HESTFEDGHE 240
241 ADAMRKRHST MGQAVDVGKR MNAKHIILTH FSARYPKVPV LPEYLDKENI GVAMDMLRVR 300
301 FDHLPLVSKL LPIFREVFVA ELFELTIKKE QRVLKDKELS EKRGQLKA
|
| Detection Method: | |
| Confidence: | 56.30103 |
| Match: | 1y44A |
| Description: | Crystal structure of RNase Z |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ribonuclease activity | 1.86896377880841 | bayes_pls_golite062009 |
| binding | 1.25638799652541 | bayes_pls_golite062009 |
| 3'-tRNA processing endoribonuclease activity | 0.998280249151351 | bayes_pls_golite062009 |
| nucleic acid binding | 0.980281910076056 | bayes_pls_golite062009 |
| catalytic activity | 0.941400907161877 | bayes_pls_golite062009 |
| hydrolase activity | 0.915337370449941 | bayes_pls_golite062009 |
| RNA binding | 0.794779546418275 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.763057588327235 | bayes_pls_golite062009 |
| endoribonuclease activity | 0.364180397113473 | bayes_pls_golite062009 |
| endonuclease activity | 0.236604397004899 | bayes_pls_golite062009 |
| protein binding | 0.0732519352239051 | bayes_pls_golite062009 |
