| Protein: | hlh-14 |
| Organism: | Caenorhabditis elegans |
| Length: | 246 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hlh-14.
| Description | E-value | Query Range |
Subject Range |
|
|
124.0 | [0..2] | [245..1] |
|
Region A: Residues: [1-101] |
1 11 21 31 41 51
| | | | | |
1 MMLESLIVIF LNSHSCKIFQ ICTSSQSFDL ELFNSSLYNL VPIRFVPIST LLVPPIRLSR 60
61 PAFPLTISLI HSVHPHSLLA TTVFPLSFYF PAQQKKEAMA K
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [102-246] |
1 11 21 31 41 51
| | | | | |
1 KNQVARNERE RKRVHQVNHG FDVLRNRLQP KNHTKKWSKA DTLREAVKYI QQLQVLLNQD 60
61 PQQPSVSSST PDYTMNNSNN FNNYAVKEEF SMYLPQNYCP QNQMSVPHGD VSHNFNSPTS 120
121 SVSSSSYSPT QMCYPPVSYS NYPHH
|
| Detection Method: | |
| Confidence: | 13.221849 |
| Match: | 1r05A |
| Description: | Solution Structure of Max B-HLH-LZ |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.47866819971988 | bayes_pls_golite062009 |
| transcription regulator activity | 2.04191582741352 | bayes_pls_golite062009 |
| DNA binding | 1.881116513908 | bayes_pls_golite062009 |
| transcription factor activity | 1.75305749487981 | bayes_pls_golite062009 |
| nucleic acid binding | 1.70236865157557 | bayes_pls_golite062009 |
| protein binding | 0.880820411513 | bayes_pls_golite062009 |
| transcription activator activity | 0.314165294474 | bayes_pls_golite062009 |
