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View Structure Prediction Details

Protein: CE36914
Organism: Caenorhabditis elegans
Length: 758 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36914.

Description E-value Query
Range
Subject
Range
gi|114639494 - gi|114639494|ref|XP_508663.2| PREDICTED: asparagine-linked glycosylation 8 [Pan troglodytes]
403.0 [0..7] [504..47]

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Predicted Domain #1
Region A:
Residues: [1-90]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEVQLVLAV TAILISFKCL LIPAYVSTDF EVHRNWMAVT WQRPLCEWYT EATSEWTLDY  60
   61 PPFFAYFELG LASVAHFFGF DECLVISKTP 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [91-218]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RFSRRILIFQ RFSVIFCDIL YIAVCALYSF RSPRLVSRIP KKLQQNGREA CFVLLASLQA  60
   61 LIICDSIHFQ YNSMLTAIFL MSLFFIDTER YLMAALSYSI LLNFKHIYVY YALGYVFYYL 120
  121 VNYFQFSG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [219-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NVLLANTPKA ISLAIALLIP FCASIFPFIH ASGVQGLQNI ATRLFPVSRG LTHAYWAPNF  60
   61 WALYNFADLC LYRVLSLLKI GKFDAPTYTS GLVQEYSHSV LPNVSPM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [326-505]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GTLCLVVISS MIVLTGLVIR RKDSADFSLF AVFSAFCFFY FGYHVHEKAI ILVTVPMTVF  60
   61 AIKNPKYHSI LIHLTCIASF SLFPLLFTPF ETLLKYAICV SYFFIQLVFL KRVTLMPLSD 120
  121 LIPTRHVASW LLMGMVEWLW TSRLPFAPLM AISILTAIEL TGLIGALIWS TFGDGIFEIW 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [506-680]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WAKATCQIRE RLIRDSTYSV QAVEDLDDVK LVAGIDTSAA KLNSDMVYIS VSFWTYPDLK  60
   61 HVATISDTRM LELPYIPQYL AVREAEVMAD FLKSVITERP ELRPDVILCD GFGEFHSRGC 120
  121 GMACHVGALS GIASIGVAKN LTLHHTYETI GMENKSKVDS FVEHCREVYK NNKTS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [681-758]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGFIPFDIVE PVVLNILRMG SSMNGVFVSA GYGIDLELST EICSQLLLNN TTIEPIRAAD  60
   61 LESRRLVREN FDGNEKLE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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