YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE36914
Organism: Caenorhabditis elegans
Length: 758 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36914.

Description E-value Query
Range
Subject
Range
gi|114639494 - gi|114639494|ref|XP_508663.2| PREDICTED: asparagine-linked glycosylation 8 [Pan troglodytes]
403.0 [0..7] [504..47]

Back

Predicted Domain #1
Region A:
Residues: [1-90]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEVQLVLAV TAILISFKCL LIPAYVSTDF EVHRNWMAVT WQRPLCEWYT EATSEWTLDY  60
   61 PPFFAYFELG LASVAHFFGF DECLVISKTP 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [91-218]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RFSRRILIFQ RFSVIFCDIL YIAVCALYSF RSPRLVSRIP KKLQQNGREA CFVLLASLQA  60
   61 LIICDSIHFQ YNSMLTAIFL MSLFFIDTER YLMAALSYSI LLNFKHIYVY YALGYVFYYL 120
  121 VNYFQFSG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [219-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NVLLANTPKA ISLAIALLIP FCASIFPFIH ASGVQGLQNI ATRLFPVSRG LTHAYWAPNF  60
   61 WALYNFADLC LYRVLSLLKI GKFDAPTYTS GLVQEYSHSV LPNVSPM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [326-505]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GTLCLVVISS MIVLTGLVIR RKDSADFSLF AVFSAFCFFY FGYHVHEKAI ILVTVPMTVF  60
   61 AIKNPKYHSI LIHLTCIASF SLFPLLFTPF ETLLKYAICV SYFFIQLVFL KRVTLMPLSD 120
  121 LIPTRHVASW LLMGMVEWLW TSRLPFAPLM AISILTAIEL TGLIGALIWS TFGDGIFEIW 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [506-680]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WAKATCQIRE RLIRDSTYSV QAVEDLDDVK LVAGIDTSAA KLNSDMVYIS VSFWTYPDLK  60
   61 HVATISDTRM LELPYIPQYL AVREAEVMAD FLKSVITERP ELRPDVILCD GFGEFHSRGC 120
  121 GMACHVGALS GIASIGVAKN LTLHHTYETI GMENKSKVDS FVEHCREVYK NNKTS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [681-758]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGFIPFDIVE PVVLNILRMG SSMNGVFVSA GYGIDLELST EICSQLLLNN TTIEPIRAAD  60
   61 LESRRLVREN FDGNEKLE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle