| Protein: | SPH1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 661 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPH1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..661] | [1..661] |
|
|
0.0 | [9..401] | [430..836] |
|
|
1.0E-54 | [194..377] | [522..708] |
|
|
3.0E-33 | [4..133] | [81..239] |
|
|
2.0E-28 | [3..115] | [113..232] |
|
|
4.0E-28 | [4..115] | [84..205] |
|
Region A: Residues: [1-124] |
1 11 21 31 41 51
| | | | | |
1 MISSELTNDQ IIDLISDYKN FKRIIEASVP EDDRRRNQNR QNRNKDLTKL SNVQFWQLTT 60
61 DVNDELMKRL TDSGADASLN DLDLKRGKAQ SKLSRLKDAK FHKLILDIFT EIERRNLHHL 120
121 DMGT
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.491 | N/A | N/A | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.462 | N/A | N/A | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.344 | N/A | N/A | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.304 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.302 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
|
Region A: Residues: [125-381] |
1 11 21 31 41 51
| | | | | |
1 HNNGLDEGDL NFYLNDTLFE SFKINDDFMS VNGIISIEVF RELKTQFTLY FQNTLHRIDP 60
61 VDTTTTRLPI LLETIIKIAK LIGDLLPVLS SVSLQSSLEN EIVYLKSALS HAITSTRYFL 120
121 TYGDLIPRIV AQSSISEVIF AFCNIAQIVK IKSTSRDDIS RNEGELSDIE AGMKPLKIIE 180
181 KVKNEKNGKD ISSLGDSGST AVSFPSSGKP ITKKSDMPVV VASPSISIIE KSESSIRESG 240
241 KVRNNTSGET NLASVSP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [382-553] |
1 11 21 31 41 51
| | | | | |
1 LKNTKNSSRI TSEPSPREGL PLKVVSNSRS PSPQGNTLPL IGKFRQDYQA SPPKKVITKP 60
61 VAETAKPYAN IPPAADVLYS PTVTKMRKFR EKVQKFAPNS GLGLRISTSE ENLNNSDVNS 120
121 TTHNANINNL VEFVESKSMV VLPMAQGILN DVQASKSKLF KSARSVSRLC QN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [554-661] |
1 11 21 31 41 51
| | | | | |
1 SIEIIPILES VIDMTTKAMV QKSFKLDLGE HCKEIIERLT DCSQKLSELC TYGCDSTKLG 60
61 KKRFYQKLAD ILMEVTKRTR ELVECVKMAN RQTLSQDLSS FFNYRSVQ
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.972 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.965 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.933 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.923 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.921 | N/A | N/A | f.25.1 | Cytochrome c oxidase subunit III-like |
