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View Structure Prediction Details

Protein: YFR045W
Organism: Saccharomyces cerevisiae
Length: 285 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YFR045W.

Description E-value Query
Range
Subject
Range
gi|151942810 - gi|151942810|gb|EDN61156.1| amino acid transporter [Saccharomyces cerevisiae YJM789]
AGC1 - Mitochondrial amino acid transporter, acts both as a glutamate uniporter and as an aspartate-glutama...
AGC1_YEAST - Mitochondrial aspartate-glutamate transporter AGC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /...
235.0 [0..1] [284..547]

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Predicted Domain #1
Region A:
Residues: [1-285]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTYPFEYLKT GLQLQPKGTA FEIILPQIKS YFVGCSALNV AAFGKTILRF VTFDKLCHSL  60
   61 NNNIDNNDNF QRLTGYNLLI AGTLTGIVES LFIIPFENIK TTLIQSAMID HKKLEKNQPV 120
  121 VNAKATFHKV ATKSTPVARI EKLLPAVKHM YQTRGPAAFV QGTTATIFRQ IANTSIQFTA 180
  181 YTAFKRLLQA RNDKASSVIT GLATSFTLVA MTQPIDVVKT RMMSQNAKTE YKNTLNCMYR 240
  241 IFVQEGMATF WKGSIFRFMK VGISGGLTFT VYEQVSLLLG FSSRS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.39794
Match: 1okcA
Description: structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle