| Protein: | IRC5 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 853 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IRC5.
| Description | E-value | Query Range |
Subject Range |
|
|
442.0 | [0..1] | [777..1] |
|
Region A: Residues: [1-217] |
1 11 21 31 41 51
| | | | | |
1 MSRCSNAALM TVVEDAVGAR VAARTRNMSN GVNYREKEVN DLTADISDSD SDLDSEDNKH 60
61 GKGDNDTAPI WLQDDVHSDE DIQLDSEDDS DTEAVQAQVV DKLAKDTKSE QKSLDDELSE 120
121 MDTKTVSLKL KKLNEFVRQS QVYSSIIADT LLHRSNEVAN ANTKDNSNSD DEEHSSKKRK 180
181 TKKKSITDFF KKQKKNEDTT TQNGAPDDAA IKQPRLL
|
| Detection Method: |  |
| Confidence: | 4.39794 |
| Match: | 2gjkA |
| Description: | No description for 2gjkA was found. |
|
Region A: Residues: [218-775] |
1 11 21 31 41 51
| | | | | |
1 KNCILKPYQL EGLNWLITLY ENGLNGILAD EMGLGKTVQS IALLAFIYEM DTKGPFLVTA 60
61 PLSTLDNWMN EFAKFAPDLP VLKYYGTNGY KERSAKLKNF FKQHGGTGIV ITSYEIILRD 120
121 TDLIMSQNWK FLIVDEGHRL KNINCRLIKE LKKINTSNRL LLTGTPLQNN LAELWSLLNF 180
181 IMPDIFADFE IFNKWFDFDS LNLGSGSNSE ALNKLINDEL QKNLISNLHT ILKPFLLRRL 240
241 KKVVLANILP PKREYIINCP MTSAQEKFYK AGLNGKLKKT MFKELIKDFF TLNDEYIGHV 300
301 SNRSIRDFIN YKLSGNETSN TDNKINPTLL QMDKLYKKNL QMEISNKKLQ NMMMQLRQII 360
361 DSTFLFYFPY LHPEDLTLET LLKTSGKLQI LQKLIPPLIS EGHKVLIYSQ FVNMLDLIED 420
421 WCDLNSFATF RIDGSVNNET RKDQLEKFNS SKDKHNIFLL STRAAGLGIN LVGADTVVLF 480
481 DSDWNPQVDL QAMDRCHRIG QESPVIVYRL CCDNTIEHVI LTRAANKRNL ERMVIQMGKF 540
541 NNLKKLALNE GSFLKANK
|
| Detection Method: | |
| Confidence: | 47.69897 |
| Match: | 1z63A |
| Description: | Sulfolobus solfataricus SWI2/SNF2 ATPase core in complex with dsDNA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [776-853] |
1 11 21 31 41 51
| | | | | |
1 AGVNVTNKDL VQELSMLLMS DESNIGFENG GQKENKATEG QLTDKEVEEL TNRSLEAYKA 60
61 NRVVDLPHVK LFETTSGL
|
| Detection Method: | |
| Confidence: | 18.0 |
| Match: | 2v1xA |
| Description: | No description for 2v1xA was found. |
