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View Structure Prediction Details

Protein: RLF1_ARATH
Organism: Arabidopsis thaliana
Length: 120 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RLF1_ARATH.

Description E-value Query
Range
Subject
Range
gi|42374767 - gi|42374767|gb|AAS13437.1| rapid alkalinization factor preproprotein [Nicotiana attenuata]
150.0 [0..13] [120..7]

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Predicted Domain #1
Region A:
Residues: [1-120]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKSFTLFLT LTILVVFIIS SPPVQAGFAN DLGGVAWATT GDNGSGCHGS IAECIGAEEE  60
   61 EMDSEINRRI LATTKYISYQ SLKRNSVPCS RRGASYYNCQ NGAQANPYSR GCSKIARCRS 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 36.886057
Match: PF05498.2
Description: No description for PF05498.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle