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View Structure Prediction Details

Protein: PLCD4_ARATH
Organism: Arabidopsis thaliana
Length: 597 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PLCD4_ARATH.

Description E-value Query
Range
Subject
Range
gi|16555231 - gi|16555231|gb|AAL23439.1| phosphoinositide-specific phospholipase C4 [Arabidopsis thaliana]
612.0 [0..7] [597..1]

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Predicted Domain #1
Region A:
Residues: [1-597]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGKKEMGSY KFCLIFTRKF RMTESGPVED VRDLFEKYTE GDAHMSPEQL QKLMTEEGGE  60
   61 GETSLEEAER IVDEVLRRKH HIAKFTRRNL TLDDFNYYLF STDLNPPIAD QVHQNMDAPL 120
  121 SHYFIFTGHN SYLTGNQLSS NCSELPIADA LRRGVRVVEL DLWPRGTDDV CVKHGRTLTK 180
  181 EVKLGKCLES IKANAFAISK YPVIITLEDH LTPKLQFKVA KMITQTFGDM LYYHDSQGCQ 240
  241 EFPSPEELKE KILISTKPPK EYLEANDTKE KDNGEKGKDS DEDVWGKEPE DLISTQSDLD 300
  301 KVTSSVNDLN QDDEERGSCE SDTSCQLQAP EYKRLIAIHA GKPKGGLRMA LKVDPNKIRR 360
  361 LSLSEQLLEK AVASYGADVI RFTQKNFLRI YPKGTRFNSS NYKPQIGWMS GAQMIAFNMQ 420
  421 GYGRALWLME GMFRANGGCG YVKKPDFLMD ASPNGQDFYP KDNSSPKKTL KVKVCMGDGW 480
  481 LLDFKKTHFD SYSPPDFFVR VGIAGAPVDE VMEKTKIEYD TWTPIWNKEF TFPLAVPELA 540
  541 LLRVEVHEHD VNEKDDFGGQ TCLPVSEIRQ GIRAVPLFNR KGVKYSSTRL LMRFEFV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 163.0
Match: 1djgA
Description: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!); PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain; Phospholipase C isozyme D1 (PLC-D1)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phospholipase C activity 1.68837208308012 bayes_pls_golite062009
hydrolase activity 1.21781019708396 bayes_pls_golite062009
phosphoric diester hydrolase activity 1.06268977958067 bayes_pls_golite062009
catalytic activity 1.05111689766686 bayes_pls_golite062009
phospholipase activity 0.87334512532594 bayes_pls_golite062009
ion transmembrane transporter activity 0.539550637107889 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.49944935937406 bayes_pls_golite062009
cation transmembrane transporter activity 0.486374653947972 bayes_pls_golite062009
lipase activity 0.46273678058621 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.273676921589143 bayes_pls_golite062009
phosphoric ester hydrolase activity 0.266794283648202 bayes_pls_golite062009
metal ion transmembrane transporter activity 0.0724768101463518 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle