| Protein: | ABR1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 391 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ABR1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
230.0 | [0..3] | [274..109] |
|
|
216.0 | [0..3] | [317..92] |
|
Region A: Residues: [1-178] |
1 11 21 31 41 51
| | | | | |
1 MCVLKVANQE DNVGKKAESI RDDDHRTLSE IDQWLYLFAA EDDHHRHSFP TQQPPPSSSS 60
61 SSLISGFSRE MEMSAIVSAL THVVAGNVPQ HQQGGGEGSG EGTSNSSSSS GQKRRREVEE 120
121 GGAKAVKAAN TLTVDQYFSG GSSTSKVREA SSNMSGPGPT YEYTTTATAS SETSSFSG
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [179-315] |
1 11 21 31 41 51
| | | | | |
1 DQPRRRYRGV RQRPWGKWAA EIRDPFKAAR VWLGTFDNAE SAARAYDEAA LRFRGNKAKL 60
61 NFPENVKLVR PASTEAQPVH QTAAQRPTQS RNSGSTTTLL PIRPASNQSV HSQPLMQSYN 120
121 LSYSEMARQQ QQFQQHH
|
| Detection Method: | |
| Confidence: | 21.0 |
| Match: | 2gccA |
| Description: | SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [316-391] |
1 11 21 31 41 51
| | | | | |
1 QQSLDLYDQM SFPLRFGHTG GSMMQSTSSS SSHSRPLFSP AAVQPPPESA SETGYLQDIQ 60
61 WPSDKTSNNY NNSPSS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.393 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.380 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.316 | N/A | N/A | a.101.1 | Uteroglobin-like |
| View | Download | 0.262 | N/A | N/A | a.159.2 | FF domain |
| View | Download | 0.254 | N/A | N/A | d.68.8 | Description not found. |
| View | Download | 0.228 | N/A | N/A | c.5.1 | MurCD N-terminal domain |
| View | Download | 0.211 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.201 | N/A | N/A | c.5.1 | MurCD N-terminal domain |
