| Protein: | gi|25408800, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 646 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25408800, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
566.0 | [0..126] | [625..1] |
|
|
285.0 | [0..422] | [635..8] |
|
|
277.0 | [0..422] | [634..3] |
|
|
274.0 | [0..422] | [635..19] |
|
|
274.0 | [0..422] | [635..8] |
|
|
270.0 | [0..422] | [635..19] |
|
Region A: Residues: [1-101] |
1 11 21 31 41 51
| | | | | |
1 MATRFDTGES IGSGKTSISR DEFAEDSLKI VSLPPVENDD SVEEMISPKK QVKSSPFTSV 60
61 FEKDGEIIHS DSIDISFSET TLEETVAMNV ECPGVVVVSV P
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.743 | N/A | N/A | d.66.1 | Alpha-L RNA-binding motif |
| View | Download | 0.743 | N/A | N/A | d.66.1 | Alpha-L RNA-binding motif |
| View | Download | 0.492 | N/A | N/A | d.15.2 | CAD & PB1 domains |
| View | Download | 0.460 | N/A | N/A | d.15.2 | CAD & PB1 domains |
| View | Download | 0.460 | N/A | N/A | d.15.2 | CAD & PB1 domains |
| View | Download | 0.449 | N/A | N/A | d.15.1 | Ubiquitin-like |
| View | Download | 0.436 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.409 | N/A | N/A | d.15.2 | CAD & PB1 domains |
| View | Download | 0.395 | N/A | N/A | d.15.1 | Ubiquitin-like |
| View | Download | 0.306 | N/A | N/A | a.228.1 | Description not found. |
| View | Download | 0.254 | N/A | N/A | d.58.14 | Ribosomal protein S6 |
| View | Download | 0.225 | N/A | N/A | d.188.1 | Prokaryotic ribosomal protein L17 |
| View | Download | 0.216 | N/A | N/A | d.131.1 | DNA clamp |
| View | Download | 0.216 | N/A | N/A | d.110.6 | Description not found. |
|
Region A: Residues: [102-319] |
1 11 21 31 41 51
| | | | | |
1 ENGSTILEEN KVGEEIKESS EISTTEGDRL GDDVLKIKDV VETDGFVVSI SDMKESLNSE 60
61 KKGQDSDGQR IVEAEKIILF AEIGDGSTFL EENKELQQIK EVSEISTESD QFGDDVYKIE 120
121 DDCVGSISDM KEILNSQKKG QDSDVQILWE TEKKNDGDTL ARASDIHKIE KNGNGSKDQR 180
181 EKVERVRVKD NAFVGRSVNI DLVDDTALFD VVPFYKKG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [320-437] |
1 11 21 31 41 51
| | | | | |
1 KDHSKRPVTA HTDKDAPRKH KKVGVEKPID KGNASSIVER NASTKVSDFR NSGEMNGKQL 60
61 RIMYSRNQME SMRLLPELVT EYEGLKNHKS ILEDYVVKEE KTEDNDDYNS ILRPAFAV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.463 | a.200.1 | Description not found. |
| View | Download | 0.249 | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.242 | a.29.16 | Description not found. |
| View | Download | 0.228 | a.74.1 | Cyclin-like |
| View | Download | 0.223 | a.26.1 | 4-helical cytokines |
| View | Download | 0.221 | a.1.1 | Globin-like |
| View | Download | 0.221 | a.1.1 | Globin-like |
|
Region A: Residues: [438-646] |
1 11 21 31 41 51
| | | | | |
1 DGEPDFDSGP PEDGIEYLRR VRHIWLSCFH HLRWEAKRIP NVKVAKVSGS KYREKEQSVY 60
61 MPQIPRAPAT GEGMGGLVAF RLLTHSSGIP FFQLAYLSVF LLTDKDTRNG LSDTGIKAEK 120
121 ADMFGEKESG LESSDCKWVV ALCASVDTPP DADTSACLRA LVRKCASLRA LEVGVLEMNK 180
181 LSLWQICSSP SQADILAKWN ERRSVFTTV
|
| Detection Method: | |
| Confidence: | 19.408935 |
| Match: | PF04938.3 |
| Description: | No description for PF04938.3 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
