| Protein: | ARFJ_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 693 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARFJ_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
739.0 | [0..1] | [688..1] |
|
Region A: Residues: [1-78] |
1 11 21 31 41 51
| | | | | |
1 MEQEKSLDPQ LWHACAGSMV QIPSLNSTVF YFAQGHTEHA HAPPDFHAPR VPPLILCRVV 60
61 SVKFLADAET DEVFAKIT
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.320 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.264 | N/A | N/A | d.17.1 | Cystatin/monellin |
| View | Download | 0.261 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.239 | N/A | N/A | c.44.2 | Enzyme IIB-cellobiose |
| View | Download | 0.226 | N/A | N/A | d.17.1 | Cystatin/monellin |
|
Region A: Residues: [79-254] |
1 11 21 31 41 51
| | | | | |
1 LLPLPGNDLD LENDAVLGLT PPSSDGNGNG KEKPASFAKT LTQSDANNGG GFSVPRYCAE 60
61 TIFPRLDYSA EPPVQTVIAK DIHGETWKFR HIYRGTPRRH LLTTGWSTFV NQKKLIAGDS 120
121 IVFLRSESGD LCVGIRRAKR GGLGSNAGSD NPYPGFSGFL RDDESTTTTS KLMMMK
|
| Detection Method: | |
| Confidence: | 37.045757 |
| Match: | 1widA |
| Description: | Solution Structure of the B3 DNA-Binding Domain of RAV1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [255-369] |
1 11 21 31 41 51
| | | | | |
1 RNGNNDGNAA ATGRVRVEAV AEAVARAACG QAFEVVYYPR ASTPEFCVKA ADVRSAMRIR 60
61 WCSGMRFKMA FETEDSSRIS WFMGTVSAVQ VADPIRWPNS PWRLLQVAWD EPDLL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.717 | N/A | N/A | c.59.1 | MurD-like peptide ligases, peptide-binding domain |
| View | Download | 0.685 | N/A | N/A | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.625 | N/A | N/A | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.603 | N/A | N/A | c.59.1 | MurD-like peptide ligases, peptide-binding domain |
| View | Download | 0.600 | N/A | N/A | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
|
Region A: Residues: [370-565] |
1 11 21 31 41 51
| | | | | |
1 QNVKRVSPWL VELVSNMPTI HLSPFSPRKK IRIPQPFEFP FHGTKFPIFS PGFANNGGGE 60
61 SMCYLSNDNN NAPAGIQGAR QAQQLFGSPS PSLLSDLNLS SYTGNNKLHS PAMFLSSFNP 120
121 RHHHYQARDS ENSNNISCSL TMGNPAMVQD KKKSVGSVKT HQFVLFGQPI LTEQQVMNRK 180
181 RFLEEEAEAE EEKGLV
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [566-693] |
1 11 21 31 41 51
| | | | | |
1 ARGLTWNYSL QGLETGHCKV FMESEDVGRT LDLSVIGSYQ ELYRKLAEMF HIEERSDLLT 60
61 HVVYRDANGV IKRIGDEPFS DFMKATKRLT IKMDIGGDNV RKTWITGIRT GENGIDASTK 120
121 TGPLSIFA
|
| Detection Method: | |
| Confidence: | 1.14 |
| Match: | 1wj6A |
| Description: | Solution structure of RSGI RUH-024, a PB1 domain in human cDNA, KIAA0049 |
Matching Structure (courtesy of the PDB): |
|
