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Protein Overview: ARFJ_ARATH

General Information:
Name(s) found: ARFJ_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
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  • Auxin response factor 10 OS=Arabidopsis thaliana GN=ARF10 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 693 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: root cap development [IGI][IMP]
    fruit development [IMP]
    response to carbohydrate stimulus [IMP]
    regulation of transcription, DNA-dependent [ISS]
    pattern specification process [IDA]
    developmental growth [IMP]
    auxin mediated signaling pathway [IMP]
    cell division [IGI]
    petal development [IMP]
    abscisic acid mediated signaling pathway [IMP]
    leaf development [IMP]
    sepal development [IMP]
    regulation of anthocyanin biosynthetic process [IMP]
    Molecular Function: miRNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQEKSLDPQ LWHACAGSMV QIPSLNSTVF YFAQGHTEHA HAPPDFHAPR VPPLILCRVV  60
   61 SVKFLADAET DEVFAKITLL PLPGNDLDLE NDAVLGLTPP SSDGNGNGKE KPASFAKTLT 120
  121 QSDANNGGGF SVPRYCAETI FPRLDYSAEP PVQTVIAKDI HGETWKFRHI YRGTPRRHLL 180
  181 TTGWSTFVNQ KKLIAGDSIV FLRSESGDLC VGIRRAKRGG LGSNAGSDNP YPGFSGFLRD 240
  241 DESTTTTSKL MMMKRNGNND GNAAATGRVR VEAVAEAVAR AACGQAFEVV YYPRASTPEF 300
  301 CVKAADVRSA MRIRWCSGMR FKMAFETEDS SRISWFMGTV SAVQVADPIR WPNSPWRLLQ 360
  361 VAWDEPDLLQ NVKRVSPWLV ELVSNMPTIH LSPFSPRKKI RIPQPFEFPF HGTKFPIFSP 420
  421 GFANNGGGES MCYLSNDNNN APAGIQGARQ AQQLFGSPSP SLLSDLNLSS YTGNNKLHSP 480
  481 AMFLSSFNPR HHHYQARDSE NSNNISCSLT MGNPAMVQDK KKSVGSVKTH QFVLFGQPIL 540
  541 TEQQVMNRKR FLEEEAEAEE EKGLVARGLT WNYSLQGLET GHCKVFMESE DVGRTLDLSV 600
  601 IGSYQELYRK LAEMFHIEER SDLLTHVVYR DANGVIKRIG DEPFSDFMKA TKRLTIKMDI 660
  661 GGDNVRKTWI TGIRTGENGI DASTKTGPLS IFA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..78] MSA 2.078993 View MSA. No confident structure predictions are available.
    2 View Details [79..254] PSI-BLAST 37.045757 Solution Structure of the B3 DNA-Binding Domain of RAV1
    3 View Details [255..369] MSA 3.10199 View MSA. No confident structure predictions are available.
    4 View Details [370..565] MSA 3.124996 View MSA. No confident structure predictions are available.
    5 View Details [566..693] FFAS03 1.14 Solution structure of RSGI RUH-024, a PB1 domain in human cDNA, KIAA0049


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle